RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 EID2Q8N6I1 236 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CCDC54Q8NEL0 328 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TADA1Q96BN2 335 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SMIM12Q96EX1 92 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MCCC1Q96RQ3 725 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MGLLQ99685 303 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ADGRE3Q9BY15 652 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 C20orf27Q9GZN8 174 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PRDM12Q9H4Q4 367 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 REEP1Q9H902 201 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HMX1Q9NP08 348 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 FAM120CQ9NX05 1096 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CCDC167Q9P0B6 97 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CXXC1Q9P0U4 656 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DRGXA6NNA5 263 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CLIC1O00299 241 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MED7O43513 233 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TSPAN2O60636 221 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RPLP2P05387 115 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SCG5P05408 212 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LAG3P18627 525 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DTYMKP23919 212 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TEAD1P28347 426 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DCTP40126 519 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HTR5AP47898 357 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DCDP81605 110 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 FOXK1P85037 733 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CDH18Q13634 790 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LRRC32Q14392 662 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RSU1Q15404 277 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RAB11BQ15907 218 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SYTL3Q4VX76 610 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 UBE3DQ7Z6J8 389 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ZBTB2Q8N680 514 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LMNTD1Q8N9Z9 388 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 FBXO15Q8NCQ5 510 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GPR152Q8TDT2 470 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GPKOWQ92917 476 aaPredicted RBP eCLIP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MFSD3Q96ES6 412 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TAAR1Q96RJ0 339 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ACO2Q99798 780 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GGACTQ9BVM4 153 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF408Q9H9D4 720 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 C1GALT1Q9NS00 363 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LCHNA4D1U4 455 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 AGAP14A8MT82 685 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MYO1GB0I1T2 1018 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ISM1B1AKI9 464 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 G3V2L1 256 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 NRP1O14786 923 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CHST10O43529 356 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CREG1O75629 220 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HLA-DPB1P04440 258 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 IFNA6P05013 189 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GALTP07902 379 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 FAUP35544 74 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TPI1P60174 286 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TSTQ16762 297 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CTU2Q2VPK5 515 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 NDUFAF6Q330K2 333 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ARHGAP15Q53QZ3 475 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF805Q5CZA5 627 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SLC25A24Q6NUK1 477 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LPCAT3Q6P1A2 487 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LINGO4Q6UY18 593 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PTCHD4Q6ZW05 846 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PLEKHH3Q7Z736 793 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 COMMD2Q86X83 199 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HS6ST3Q8IZP7 471 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 OR6K3Q8NGY3 331 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 OLIG1Q8TAK6 271 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ROBO4Q8WZ75 1007 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HLA-CQ95604 372 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM125Q96AQ2 219 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 WWTR1Q9GZV5 400 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ARL6Q9H0F7 186 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ABCG5Q9H222 651 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DHX35Q9H5Z1 703 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 BRF2Q9HAW0 419 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PTPRHQ9HD43 1115 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ADAP2Q9NPF8 381 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ACSS2Q9NR19 701 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DLL4Q9NR61 685 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PRMT7Q9NVM4 692 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RBAKQ9NYW8 714 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CNTN6Q9UQ52 1028 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SNRPGP15A8MWD9 76 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 UBE2Q2LH0YL09 131 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RFXAPO00287 272 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 UCHL1P09936 223 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CDKN1BP46527 198 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DLX5P56178 289 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TNFRSF9Q07011 255 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DENND1BQ6P3S1 775 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ADIPOR2Q86V24 386 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CBWD2Q8IUF1 395 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MISPQ8IVT2 679 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SLC22A15Q8IZD6 547 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MTURNQ8N3F0 131 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 COMMD1Q8N668 190 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms