RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Tsc22d4Q9EQN3 387 aa11.52□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Rtp4Q9ER80 249 aaKnown RBP11.52□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Dnaja4Q9JMC3 397 aa11.52□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Bdp1Q571C7 2467 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Col6a3E9PWQ3 3284 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Ttll2A4Q9E4 540 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gm6133B2RY53 190 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Vmn2r106E9PY92 862 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gm6811E9Q3Y8 510 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Fbxw9F8VPX2 458 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Vmn2r4K7N784 913 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 H2-Q1O19441 368 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 P04214 136 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Hoxb6P09023 224 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Htr3aP23979 487 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Htr7P32304 448 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Fgf9P54130 208 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Timm13P62075 95 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 UbqlnlQ14DL0 610 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Nell1Q2VWQ2 810 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Pgap2Q3TQR0 254 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 TepsinQ3U3N6 573 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Slc44a5Q5RJI2 710 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Orm1Q60590 207 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Map4k2Q61161 821 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Ostf1Q62422 215 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Inppl1Q6P549 1257 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Pgr15lQ80T54 456 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Rbm11Q80YT9 238 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Fbxl21Q8BFZ4 434 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Fbxo48Q8CAT8 161 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Lysmd4Q8CC84 293 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gm5591Q8CDK1 855 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Pih1d2Q8CHR9 315 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Spp2Q8K1I3 203 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Pphln1Q8K2H1 381 aaKnown RBP11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Atat1Q8K341 421 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Oard1Q8R5F3 152 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Cadm1Q8R5M8 456 aaKnown RBP11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Impa2Q91UZ5 290 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Slc35b3Q922Q5 369 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Clcc1Q99LI2 539 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Cthrc1Q9D1D6 245 aa11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Exosc1Q9DAA6 195 aaKnown RBP11.51□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Igkv12-98A0A0G2JGF9 115 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Cd300ld4A2A7W1 245 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Tmem236A2ARJ3 344 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gm8180E9PXN0 145 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Olfr171G5E8J1 314 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Shisa8J3QNX5 399 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Vmn2r21K7N6Y7 853 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gm8229K7N749 213 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Vmn2r20L7N2B1 853 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gp1baO35930 734 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Atxn2O70305 1285 aaKnown RBP11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Cdc6O89033 562 aaKnown RBP11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gnrh1P13562 90 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Prdx3P20108 257 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 VipP32648 170 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gbx2P48031 348 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Cav3P51637 151 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 RabggtbP53612 339 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Pcbp3P57722 371 aaKnown RBP11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Sf3b6P59708 125 aaKnown RBP11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Mtf1Q07243 675 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Usp30Q3UN04 517 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Nfatc2Q60591 927 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Ddx5Q61656 614 aaKnown RBP11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Cd300ld3Q6SJQ5 245 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 McubQ810S1 345 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Pan2Q8BGF7 1200 aaKnown RBP11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Luzp2Q8BGY3 345 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Slc22a29Q8BWG6 551 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Fndc3aQ8BX90 1198 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Zbtb26Q8C8S0 451 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Agbl3Q8CDP0 1006 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Olfr633Q8VF02 312 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Olfr541Q8VGM0 312 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Olfr532Q8VGT4 309 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Cdhr1Q8VHP6 859 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Emid1Q91VF5 444 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Fuca2Q99KR8 461 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Prelid3bQ9CYY7 195 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Ttyh1Q9D3A9 450 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Efhc2Q9D485 750 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Tmem41aQ9D8U2 264 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Plscr3Q9JIZ9 296 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Vps29Q9QZ88 182 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Sgk2Q9QZS5 367 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Gm12695A2AGB2 545 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 1700001O22RikA2APZ1 375 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Olfr74A2BHP6 318 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 4930455H04RikD3Z622 58 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Vmn2r22E9Q7S8 853 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Vmn2r117K7N6V1 857 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Mapk12O08911 367 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 LifP09056 203 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Pitx2P97474 317 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Adra1aP97718 466 aa11.5□□□□□ -0.57
Ufd1-201ENSMUST00000005394 Tekt4Q149S1 447 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms