RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 EXOSC1Q9Y3B2 195 aaKnown RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 PCDHGB1Q9Y5G3 927 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 PLOD2O00469 737 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 TSPAN4O14817 238 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 NAA10P41227 235 aaPredicted RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 SMCO1Q147U7 214 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 FLYWCH1Q4VC44 716 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 ZNF542PQ5EBM4 170 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 DCP2Q8IU60 420 aaKnown RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 ZBTB20Q9HC78 741 aaPredicted RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 SACM1LQ9NTJ5 587 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 DCAF13Q9NV06 445 aaKnown RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 LYARQ9NX58 379 aaKnown RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 ANKRD36CQ5JPF3 1778 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 UBFD1O14562 309 aaKnown RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 EIF1AYO14602 144 aaKnown RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 ATF6P18850 670 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 CAMK1Q14012 370 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 SCGB2B2Q4G0G5 96 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 FUZQ9BT04 418 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 TRIM3O75382 744 aaPredicted RBP15.43■□□□□ 0.06
GABRB3-215ENST00000622697 MT-ND5P03915 603 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 CCKBRP32239 447 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 CD97P48960 835 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 RAB33AQ14088 237 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 GRIN2CQ14957 1233 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 OR8J1Q8NGP2 316 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 NEIL2Q969S2 332 aa15.43■□□□□ 0.06
GABRB3-215ENST00000622697 RPS3P23396 243 aaKnown RBP eCLIP15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ACVR1BP36896 505 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 KCNC1P48547 511 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 MEDAGQ5VYS4 303 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 KLBQ86Z14 1044 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 SPARTQ8N0X7 666 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 UBXN10Q96LJ8 280 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 MACROD1Q9BQ69 325 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 IL21RQ9HBE5 538 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ATE1O95260 518 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ELAVL3Q14576 367 aaKnown RBP15.42■□□□□ 0.06
GABRB3-215ENST00000622697 FIGNL1Q6PIW4 674 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ZNF527Q8NB42 609 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 OR52N2Q8NGI0 321 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 CASD1Q96PB1 797 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 IRF2BPLQ9H1B7 796 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 COQ9O75208 318 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 RETP07949 1114 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 GCGRP47871 477 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 PUDPQ08623 228 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 MAP4K2Q12851 820 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 RUNDC3AQ59EK9 446 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 CEP68Q76N32 757 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 OR52P1PQ8NH57 321 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 A0A1W2PQU0 124 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 OR6C74A6NCV1 312 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 M0R3H8 397 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ARL6IP5O75915 188 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 PIN1Q13526 163 aaPredicted RBP15.42■□□□□ 0.06
GABRB3-215ENST00000622697 C1orf61Q13536 156 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 OR4C11Q6IEV9 310 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 GRHL2Q6ISB3 625 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ANKRD13BQ86YJ7 626 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 FAM46AQ96IP4 442 aaKnown RBP15.42■□□□□ 0.06
GABRB3-215ENST00000622697 KLF16Q9BXK1 252 aaPredicted RBP15.42■□□□□ 0.06
GABRB3-215ENST00000622697 OR8D2Q9GZM6 311 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 HCN2Q9UL51 889 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.42■□□□□ 0.06
GABRB3-215ENST00000622697 CDK4P11802 303 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 PAMR1Q6UXH9 720 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ARMCX6Q7L4S7 300 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 JAGN1Q8N5M9 183 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 TSTD1Q8NFU3 115 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 OR2T33Q8NG76 320 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 OR2T11Q8NH01 316 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 PMM1Q92871 262 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ECHDC3Q96DC8 303 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 NELL2Q99435 816 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 DKK3Q9UBP4 350 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 ABCG2Q9UNQ0 655 aa15.42■□□□□ 0.06
GABRB3-215ENST00000622697 CCDC85CA6NKD9 419 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 HEPACAM2A8MVW5 462 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 DNAJB5O75953 348 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 ZNF432O94892 652 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 TFAP2AP05549 437 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 GRPRP30550 384 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 PRSS48Q7RTY5 328 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 TMPRSS9Q7Z410 1059 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 OTUB2Q96DC9 234 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 SGSHP51688 502 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 HK3P52790 923 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 SIM1P81133 766 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-215ENST00000622697 GSTM4Q03013 218 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 LRRC20Q8TCA0 184 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 NMNAT1Q9HAN9 279 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-215ENST00000622697 CLCN2P51788 898 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 MAB21L1Q13394 359 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 DUS1LQ6P1R4 473 aaKnown RBP15.41■□□□□ 0.06
GABRB3-215ENST00000622697 ASPGQ86U10 573 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 LRIG1Q96JA1 1093 aa15.41■□□□□ 0.06
GABRB3-215ENST00000622697 SEC61A2Q9H9S3 476 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms