RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 RHOP08100 348 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 MAGEA2P43356 314 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 SEPHS1P49903 392 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 METAP1P53582 386 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ITGA1P56199 1179 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 CDK6Q00534 326 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ZNF763Q0D2J5 394 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PPIGQ13427 754 aaKnown RBP eCLIP5.1□□□□□ -1.59
VAPA-203ENST00000577539 KEAP1Q14145 624 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 CTF1Q16619 201 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 EXOC3L2Q2M3D2 409 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 GAB4Q2WGN9 574 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 SPIN4Q56A73 249 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ZNF805Q5CZA5 627 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 TMEM215Q68D42 235 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 TRIM40Q6P9F5 258 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 LIPIQ6XZB0 460 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RNF165Q6ZSG1 346 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 MSANTD1Q6ZTZ1 278 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ADIPOR2Q86V24 386 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 NLGN4XQ8N0W4 816 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 OR9Q2Q8NGE9 314 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PHF10Q8WUB8 498 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 REPS1Q96D71 796 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 DCSTAMPQ9H295 470 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 DUSP21Q9H596 190 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 REEP4Q9H6H4 257 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ACOT13Q9NPJ3 140 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RAD18Q9NS91 495 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RLIMQ9NVW2 624 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 SPATA6Q9NWH7 488 aaPredicted RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 CORO2BQ9UQ03 480 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 FRMPD3Q5JV73 1810 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 A0A1W2PRB8 838 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 FAM229AH3BQW9 127 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 J3KTA2 159 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ADAMDEC1O15204 470 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 SGTAO43765 313 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 KDM1AO60341 852 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 JRKO75564 520 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 POP7O75817 140 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 STSP08842 583 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 INHBBP09529 407 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 SYN1P17600 705 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 NAT1P18440 290 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 IL1RNP18510 177 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PCMT1P22061 227 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ALAS2P22557 587 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 HOXA9P31269 272 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ARL4DP49703 201 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 EIF2B2P49770 351 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 WDR5P61964 334 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 RELAQ04206 551 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ELP6Q0PNE2 266 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 CBX3Q13185 183 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 KCNC3Q14003 757 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 VEZF1Q14119 521 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 TIGD6Q17RP2 521 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PARS2Q7L3T8 475 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 GRASPQ7Z6J2 395 aaPredicted RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 NRSN1Q8IZ57 195 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 CHCHD6Q9BRQ6 235 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 DYRK4Q9NR20 520 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 C14orf119Q9NWQ9 140 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 GPR83Q9NYM4 423 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 MAFFQ9ULX9 164 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 SH2B3Q9UQQ2 575 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RNF6Q9Y252 685 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 TMEM98Q9Y2Y6 226 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PPIL1Q9Y3C6 166 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PRR23AA6NEV1 266 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 H0YIV9 168 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 K7ESM1 405 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 UGDHO60701 494 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PSIP1O75475 530 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 ALX3O95076 343 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 GABARAPO95166 117 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 CTSLP07711 333 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 IL3P08700 152 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PTPN2P17706 415 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 PRPH2P23942 346 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ERVFC1P60507 584 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RAE1P78406 368 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 NFE2L1Q14494 772 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 COLEC12Q5KU26 742 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 HENMT1Q5T8I9 393 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 NEK10Q6ZWH5 1172 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ENTHD1Q8IYW4 607 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 MMP21Q8N119 569 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 VANGL1Q8TAA9 524 aaPredicted RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 S100ZQ8WXG8 99 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RAB8BQ92930 207 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 MYDGFQ969H8 173 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ZFYVE19Q96K21 471 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 VPS35Q96QK1 796 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 NLNQ9BYT8 704 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RERGLQ9H628 205 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 EPS8L2Q9H6S3 715 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ZMAT4Q9H898 229 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms