RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PRRC2BQ5JSZ5 2229 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 TEX13CA0A0J9YWL9 993 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 A0A1W2PQF6 199 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 A0A1W2PRB8 838 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MGAT4DA6NG13 374 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CBY3A6NI87 242 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 OR2AG2A6NM03 316 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CCT8L1PA6NM43 557 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 A8MUI8 341 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 C2orf74A8MZ97 194 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 B8ZZF3 427 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TEX22C9J3V5 150 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 LRRN3E7EW58 273 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 POC1B-GALNT4F8VUJ3 575 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 H3BMM5 538 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 H3BQ06 376 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 KCNK1O00180 336 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 QSOX1O00391 747 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 GNB5O14775 395 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SCAMP2O15127 329 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 HS6ST1O60243 411 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 KLK8O60259 260 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 UGT1A9O60656 530 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PAGE4O60829 102 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SAP30O75446 220 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 STX11O75558 287 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 JRKO75564 520 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CNTN5O94779 1100 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TTC4O95801 387 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 DHFRP00374 187 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TIMP1P01033 207 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 VIPP01282 170 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MT-ND2P03891 347 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 AMY2AP04746 511 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 IFNA6P05013 189 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 KRT16P08779 473 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 STSP08842 583 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ANXA4P09525 319 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 CD3GP09693 182 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CHRNB1P11230 501 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MYOGP15173 224 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF8P17098 575 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 AMY2BP19961 511 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PRPS1L1P21108 318 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MALP21145 153 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 UGT1A1P22309 533 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PSMB4P28070 264 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PSMB6P28072 239 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TACR3P29371 465 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SLC6A4P31645 630 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 IFNA8P32881 189 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CD68P34810 354 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 OR1D2P34982 312 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CPOXP36551 454 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ARL4AP40617 200 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MC3RP41968 323 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ELK3P41970 407 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MAGEA11P43364 429 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MMP13P45452 471 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SLC6A12P48065 614 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 KCNJ3P48549 501 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CLK3P49761 638 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 RAB9AP51151 201 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SGSHP51688 502 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 KCNQ1P51787 676 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 IST1P53990 364 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 EMP2P54851 167 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CDH4P55283 916 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 AP3S2P59780 193 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SPCS3P61009 180 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MAGOHP61326 146 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 CRADDP78560 199 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 HSF2Q03933 536 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TLE1Q04724 770 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SULT2A1Q06520 285 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MZT1Q08AG7 82 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 BST1Q10588 318 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PMPCAQ10713 525 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TSPAN31Q12999 210 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 KLF10Q13118 480 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PRKAA1Q13131 559 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 GPR17Q13304 367 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CTBP1Q13363 440 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 NAB1Q13506 487 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 NFYCQ13952 458 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MFSD13AQ14CX5 517 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PAFAH1B3Q15102 231 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 PCK2Q16822 640 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PDCD4Q53EL6 469 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 C4orf17Q53FE4 359 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CMPK2Q5EBM0 449 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ARSJQ5FYB0 599 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 PCID2Q5JVF3 399 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 LDLRAP1Q5SW96 308 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 HES5Q5TA89 166 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MANEALQ5VSG8 457 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 DENND2CQ68D51 928 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF470Q6ECI4 717 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MSANTD2Q6P1R3 559 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 DUS1LQ6P1R4 473 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms