RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 C18orf21Q32NC0 220 aaPredicted RBP14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 ACSF3Q4G176 576 aaPredicted RBP14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 TMEM198Q66K66 360 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 LYPD8Q6UX82 237 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 ZNF793Q6ZN11 406 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 SYDE1Q6ZW31 735 aaPredicted RBP14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 GAS2L3Q86XJ1 694 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 GPSM1Q86YR5 675 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 FAM13CQ8NE31 585 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 ANKRD49Q8WVL7 239 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 C18orf12Q96KH6 178 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 ZNF597Q96LX8 424 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 KRT12Q99456 494 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 TMEM79Q9BSE2 394 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 DOHHQ9BU89 302 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 SLC6A15Q9H2J7 730 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 RHOJQ9H4E5 214 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 RPF2Q9H7B2 306 aaKnown RBP14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 ADGRE2Q9UHX3 823 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 PPP2R2CQ9Y2T4 447 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 PSAT1Q9Y617 370 aa14.48□□□□□ -0.09
HERPUD1-215ENST00000568676 ARHGAP21Q5T5U3 1957 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 C15orf38-AP3S2A0A0A6YYH1 394 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 IQANK1A0A1B0GTG1 560 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 MYOCOSA0A1B0GUC4 107 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 TP53I11O14683 189 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 TAPBPO15533 448 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 SNX4O95219 450 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 ATE1O95260 518 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 TACR1P25103 407 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 GDF1P27539 372 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 MSH2P43246 934 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 SSR2P43308 183 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 ARL4CP56559 192 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 ATP6V0D1P61421 351 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 POU4F1Q01851 419 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 IRF8Q02556 426 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 LTBQ06643 244 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 DUSP8Q13202 625 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 SNTB1Q13884 538 aaKnown RBP14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 ZNF460Q14592 562 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 NTRK2Q16620 822 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 SPRED3Q2MJR0 410 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 PRAMEF20Q5VT98 475 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 NSUN5P2Q63ZY6 315 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 UBE3DQ7Z6J8 389 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 LRRC8AQ8IWT6 810 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 ST13P4Q8IZP2 240 aaPredicted RBP14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 TAGAPQ8N103 731 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 SNX31Q8N9S9 440 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 PDPRQ8NCN5 879 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 NAXEQ8NCW5 288 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 TNIP2Q8NFZ5 429 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 ZNF473Q8WTR7 871 aaKnown RBP14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 SREK1Q8WXA9 508 aaKnown RBP14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 TSPAN17Q96FV3 270 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 CMTM7Q96FZ5 175 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 OSBPL9Q96SU4 736 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 SECISBP2Q96T21 854 aaKnown RBP14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 CENPKQ9BS16 269 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 PRDM14Q9GZV8 571 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 NEUROD4Q9HD90 331 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 MOCS1Q9NZB8 636 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 PHF11Q9UIL8 331 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 ACANP16112 2415 aa14.47□□□□□ -0.09
HERPUD1-215ENST00000568676 CD8B2A6NJW9 211 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 FGF17O60258 216 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 IL18BPO95998 194 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 ALOX15P16050 662 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 CD22P20273 847 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 IVDP26440 423 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 HOXC12P31275 282 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 GALNSP34059 522 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 OPRM1P35372 400 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 HSPA7P48741 367 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 TMED10P49755 219 aaKnown RBP14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 CRYZQ08257 329 aaKnown RBP14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 CHIT1Q13231 466 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 NHSL2Q5HYW2 709 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 ADNP2Q6IQ32 1131 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 MED27Q6P2C8 311 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 POMZP3Q6PJE2 187 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 RNF111Q6ZNA4 994 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 LAS2Q8IYD9 372 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 OR10G3Q8NGC4 313 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 CAPZA3Q96KX2 299 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 JSRP1Q96MG2 331 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 TIMP4Q99727 224 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 PROK2Q9HC23 129 aa14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 BEX4Q9NWD9 120 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 PTBP2Q9UKA9 531 aaKnown RBP14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 CNOT11Q9UKZ1 510 aaKnown RBP14.46□□□□□ -0.09
HERPUD1-215ENST00000568676 AKAP6Q13023 2319 aa14.46□□□□□ -0.1
HERPUD1-215ENST00000568676 EML6Q6ZMW3 1958 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 PRAMEF4O60810 478 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 CDH16O75309 829 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 TRIM3O75382 744 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 S100BP04271 92 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 HPNP05981 417 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 CTSSP25774 331 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms