RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 AP3B1O00203 1094 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PFDN6O15212 129 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 NDUFS4O43181 175 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 ITGA10O75578 1167 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 GLSO94925 669 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 FTCDO95954 541 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 IGHG3P01860 377 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 F7P08709 466 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 SLC35G6P0C7Q6 338 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 MPC1LP0DKB6 136 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CDH1P12830 882 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 NPPBP16860 134 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 ALOX12P18054 663 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 OGNP20774 298 aaKnown RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 MAOAP21397 527 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 DNASE1P24855 282 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 MGAT1P26572 445 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 ACVR2AP27037 513 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 RPL22P35268 128 aaKnown RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 ANP32AP39687 249 aaKnown RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CLCN2P51788 898 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 GPR143P51810 404 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 HMGA2P52926 109 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PPIAP62937 165 aaKnown RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 MEF2AQ02078 507 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 DBPQ10586 325 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CUL1Q13616 776 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 TTLL9Q3SXZ7 439 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 DEFB134Q4QY38 66 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 XKR6Q5GH73 641 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 NEPROQ6NW34 567 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 ZNF549Q6P9A3 640 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 LCTLQ6UWM7 567 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 B3GNT6Q6ZMB0 384 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 UBE2R2Q712K3 238 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 Q71RC1 249 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PEX26Q7Z412 305 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CAMKMTQ7Z624 323 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 BIVMQ86UB2 503 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CTAGE6Q86UF2 777 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CDC20BQ86Y33 519 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CYP4Z2PQ8N1L4 340 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 TMEM156Q8N614 296 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 OTUD6BQ8N6M0 293 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CCDC89Q8N998 374 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PSD4Q8NDX1 1056 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 WFDC11Q8NEX6 87 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 B3GNT7Q8NFL0 401 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 OR4K1Q8NGD4 311 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 OR5M9Q8NGP3 310 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 OR5M3Q8NGP4 307 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 C1orf54Q8WWF1 131 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 KCNJ9Q92806 393 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 NEIL1Q96FI4 390 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 RMND5BQ96G75 393 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 HES6Q96HZ4 224 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 SPATA9Q9BWV2 254 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 DEFB126Q9BYW3 111 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 FRMD8P1Q9BZ68 369 aaPredicted RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 TTTY12Q9BZ98 90 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PCBD2Q9H0N5 130 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 NECTIN3Q9NQS3 549 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 EIF2B3Q9NR50 452 aaKnown RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 INTS10Q9NVR2 710 aaKnown RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 BFARQ9NZS9 450 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PPIEQ9UNP9 301 aaKnown RBP4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 ZNF148Q9UQR1 794 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PLEKHA6Q9Y2H5 1048 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 DHRS7Q9Y394 339 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 TESMINQ9Y4I5 508 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 LIPGQ9Y5X9 500 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 CPAMD8Q8IZJ3 1885 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 ANKRD12Q6UB98 2062 aa4.87□□□□□ -1.63
AC055855.3-201ENST00000564269 PKDREJQ9NTG1 2253 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 TRBV11-1A0A0K0K1C0 115 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 TCRBV7S3A2A0A539 114 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 A6NNC1 897 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 FAM166BA8MTA8 275 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 SYT5O00445 386 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 BCKDKO14874 412 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 SLC16A5O15375 505 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 OR1F1O43749 312 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 PRKNO60260 465 aaPredicted RBP4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 CEP104O60308 925 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 FZD7O75084 574 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 AVILO75366 819 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 OR2J2O76002 312 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 MYO1DO94832 1006 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 TUBB4AP04350 444 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 SMIM10L1P0DMW3 83 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 ENO3P13929 434 aaPredicted RBP4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 MAGEA5P43359 124 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 KIR2DL3P43628 341 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 SSR4P51571 173 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 DGKQP52824 942 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 CTBP1Q13363 440 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 TOP3AQ13472 1001 aaPredicted RBP4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 NAE1Q13564 534 aa4.86□□□□□ -1.63
AC055855.3-201ENST00000564269 SNX1Q13596 522 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms