RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 HCN1O60741 890 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 SSTR1P30872 391 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 GGT5P36269 586 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 DGKQP52824 942 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 ADAM8P78325 824 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 IGLV3-21P80748 117 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-210ENST00000557431 TGM3Q08188 693 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 DUSP8Q13202 625 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 SLAMF1Q13291 335 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 ZNF267Q14586 743 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-210ENST00000557431 MPEG1Q2M385 716 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 AP5B1Q2VPB7 878 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 FLYWCH1Q4VC44 716 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 DCST1Q5T197 706 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 SULT1C3Q6IMI6 304 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 PLXDC2Q6UX71 529 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 ZBED8Q8IZ13 594 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 FBXW8Q8N3Y1 598 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 LIX1Q8N485 282 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 MYRIPQ8NFW9 859 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 GOT1L1Q8NHS2 421 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-210ENST00000557431 NEIL3Q8TAT5 605 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 LINC01560Q8TB33 94 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 NUBPLQ8TB37 319 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
SLIRP-210ENST00000557431 WDR34Q96EX3 536 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 TBCDQ9BTW9 1192 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 EFCAB11Q9BUY7 163 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 PHACTR1Q9C0D0 580 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 EPB41L4BQ9H329 900 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 KCNF1Q9H3M0 494 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 EHD1Q9H4M9 534 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 ZFP64Q9NPA5 681 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 DLL4Q9NR61 685 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 PTBP2Q9UKA9 531 aaKnown RBP12.94□□□□□ -0.34
SLIRP-210ENST00000557431 CNOT11Q9UKZ1 510 aaKnown RBP12.94□□□□□ -0.34
SLIRP-210ENST00000557431 BOKQ9UMX3 212 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-210ENST00000557431 DSCAMO60469 2012 aa12.94□□□□□ -0.34
SLIRP-210ENST00000557431 FAM221AA4D161 298 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 CLPSP04118 112 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 COX7A2P14406 83 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 GABRA1P14867 456 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 ASCL1P50553 236 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 ZNF136P52737 540 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 CRYZQ08257 329 aaKnown RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 DLG1Q12959 904 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 POU4F3Q15319 338 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 POMZP3Q6PJE2 187 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 CMC1Q7Z7K0 106 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 PRR22Q8IZ63 422 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 LRRC25Q8N386 305 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 TCAIMQ8N3R3 496 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 PDPRQ8NCN5 879 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 BBOF1Q8ND07 529 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 LRRC39Q96DD0 335 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 DOHHQ9BU89 302 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 CAPS2Q9BXY5 557 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 PITHD1Q9GZP4 211 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 WWTR1Q9GZV5 400 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 ALG9Q9H6U8 611 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 RPF2Q9H7B2 306 aaKnown RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 CNOT10Q9H9A5 744 aaKnown RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 B4GALT7Q9UBV7 327 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 RNF112Q9ULX5 631 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 RPH3AQ9Y2J0 694 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 SNX24Q9Y343 169 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 SPACA6W5XKT8 324 aa12.93□□□□□ -0.34
SLIRP-210ENST00000557431 MAP1AP78559 2803 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-210ENST00000557431 ABCA2Q9BZC7 2435 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 LRRC14BA6NHZ5 514 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 SUPT3HB4E1H0 165 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 UBXN8O00124 270 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 SYT5O00445 386 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 PLPP1O14494 284 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 SUPT3HO75486 399 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 TRAPPC6AO75865 159 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 FAM155BO75949 473 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 SCELO95171 688 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 ACSL3O95573 720 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 ALOX15P16050 662 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 SSTR4P31391 388 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 RPL21P46778 160 aaKnown RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 FBXW4P57775 412 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 PLIN5Q00G26 463 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 DR1Q01658 176 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 TNFRSF17Q02223 184 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 FRG1Q14331 258 aaKnown RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 EBPQ15125 230 aaKnown RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 HIST2H2ACQ16777 129 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 PAGE2BQ5JRK9 111 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 KHDRBS2Q5VWX1 349 aaKnown RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 FBXW10Q5XX13 1052 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 HIST2H2AA3Q6FI13 130 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 DESI1Q6ICB0 168 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 OR4C11Q6IEV9 310 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms