RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 BAZ2BQ9UIF8 2168 aaKnown RBP1.34□□□□□ -2.2
PRPF39-208ENST00000554785 TP53BP1Q12888 1972 aaPredicted RBP1.34□□□□□ -2.2
PRPF39-208ENST00000554785 ABCA7Q8IZY2 2146 aa1.34□□□□□ -2.2
PRPF39-208ENST00000554785 AHCTF1Q8WYP5 2266 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CRYBG3Q68DQ2 2970 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 DENND4AQ7Z401 1863 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ADGRA3Q8IWK6 1321 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 NUP205Q92621 2012 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ADGRG4Q8IZF6 3080 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 BSNQ9UPA5 3926 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CACNA1DQ01668 2161 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LAMA4Q16363 1823 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 EML5Q05BV3 1969 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SDR42E2A6NKP2 422 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 HIDE1A8MVS5 230 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SNURFLB1AK76 121 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LOC730098B7Z3J9 87 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PRSS46E5RG02 174 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SLCO1B7G3V0H7 640 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 FPGTO14772 594 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PRKAB2O43741 272 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 KRT33AO76009 404 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 MOCS2O96007 188 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 RAF1P04049 648 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ATP1B1P05026 303 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PRKAR1AP10644 381 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CEACAM1P13688 526 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 GNB3P16520 340 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 AOC1P19801 751 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SSTR1P30872 391 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PI4KAP42356 2102 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 KCNJ1P48048 391 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 NPBWR1P48145 328 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 DNA2P51530 1060 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 GNB1P62873 340 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 IL10RBQ08334 325 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 TRIM29Q14134 588 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SLMAPQ14BN4 828 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SF3A2Q15428 464 aaKnown RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 EXT1Q16394 746 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF74Q16587 644 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 TYSND1Q2T9J0 566 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 USH1GQ495M9 461 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CCDC158Q5M9N0 1113 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CEP85LQ5SZL2 805 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LCE3CQ5T5A8 94 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 N4BP2L1Q5TBK1 243 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 FAM46CQ5VWP2 391 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ARHGAP17Q68EM7 881 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 GBP6Q6ZN66 633 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 IQCA1Q86XH1 822 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 KRTAP7-1Q8IUC3 87 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CREBRFQ8IUR6 639 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CROCCP3Q8IVE0 287 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CCDC60Q8IWA6 550 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SYCP3Q8IZU3 236 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LSMEM2Q8N112 164 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SLC37A3Q8NCC5 494 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 DDHD1Q8NEL9 900 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 OR10G8Q8NGN5 311 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 OR1L3Q8NH93 324 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 CTCFLQ8NI51 663 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 FIBINQ8TAL6 211 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PHOSPHO2Q8TCD6 241 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 AFAP1L1Q8TED9 768 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 GRK7Q8WTQ7 553 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 UBLCP1Q8WVY7 318 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 APOBEC4Q8WW27 367 aaKnown RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ARHGAP45Q92619 1136 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LGALS12Q96DT0 336 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PRAC1Q96KF2 57 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 KLHL5Q96PQ7 755 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 BTBD9Q96Q07 612 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LPAR4Q99677 370 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 NKX3-1Q99801 234 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 TRIM4Q9C037 500 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 DNAI2Q9GZS0 605 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LSG1Q9H089 658 aaKnown RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PNNQ9H307 717 aaKnown RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 TMEM206Q9H813 350 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 VCPKMTQ9H867 229 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 RNF121Q9H920 327 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 TUFT1Q9NNX1 390 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PHPT1Q9NRX4 125 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SLCO1C1Q9NYB5 712 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 EPHA6Q9UF33 1036 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LEF1Q9UJU2 399 aaPredicted RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 GMEB2Q9UKD1 530 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 LIPT1Q9Y234 373 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 PPP2R2CQ9Y2T4 447 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 KLK4Q9Y5K2 254 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 GREB1Q4ZG55 1949 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 POLQO75417 2590 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ROBO3Q96MS0 1386 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SALL1Q9NSC2 1324 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 SPTBN1Q01082 2364 aaKnown RBP1.33□□□□□ -2.2
PRPF39-208ENST00000554785 TRAV18A0A075B6X5 111 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 A0A087WW49 117 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 A0A0B4J203 849 aa1.33□□□□□ -2.2
PRPF39-208ENST00000554785 ILVBLA1L0T0 632 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms