RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TAC3Q9UHF0 121 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ANAPC5Q9UJX4 755 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 RIMKLBQ9ULI2 386 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ERVK-11Q9UQG0 969 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 YARS2Q9Y2Z4 477 aaKnown RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PCDHGB3Q9Y5G1 929 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 SLC22A7Q9Y694 548 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 CCDC88CQ9P219 2028 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 CACNA1CQ13936 2221 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PINLYPA6NC86 204 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 SAGE2PA6NJ88 616 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 FAM166BA8MTA8 275 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 A8MVJ9 347 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 E7ENX8 843 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 MYO1CO00159 1063 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CLDN4O14493 209 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HAT1O14929 419 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CASKO14936 926 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PSTPIP1O43586 416 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HCN1O60741 890 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 B4GALT2O60909 372 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 DNAJB6O75190 326 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 RDH16O75452 317 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 ITGA10O75578 1167 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CDC123O75794 336 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 ZFAND5O76080 213 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 GLSO94925 669 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 MATN4O95460 622 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 GAS8O95995 478 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 SERPINC1P01008 464 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HRGP04196 525 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 RBP3P10745 1247 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 IL1RNP18510 177 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CNR1P21554 472 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 BMP5P22003 454 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 RPS3P23396 243 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 JAK1P23458 1154 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CEACAM8P31997 349 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 TTPAP49638 278 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 SSR4P51571 173 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CLCN2P51788 898 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PNLIPRP1P54315 467 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 EIF3EP60228 445 aaKnown RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 RPS15AP62244 130 aaKnown RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 SKP1P63208 163 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 TAP2Q03519 686 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HERC3Q15034 1050 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HYAL4Q2M3T9 481 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 TYSND1Q2T9J0 566 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 ASTE1Q2TB18 679 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CCDC38Q502W7 563 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 TSTD2Q5T7W7 516 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 NIPAL1Q6NVV3 410 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 ZNF534Q76KX8 674 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 ZNF627Q7L945 461 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PRSS41Q7RTY9 318 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 MAATS1Q7Z4T9 603 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 VN1R4Q7Z5H5 301 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 YTHDF3Q7Z739 585 aaKnown RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 LINC00523Q86TU6 105 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 LRRC6Q86X45 466 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PDSS2Q86YH6 399 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CCDC50Q8IVM0 306 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 KATNAL2Q8IYT4 538 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 FAM109AQ8N4B1 249 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 TMEM251Q8N6I4 163 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PSD4Q8NDX1 1056 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 B3GNT7Q8NFL0 401 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 OR2M7Q8NG81 312 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 OR13J1Q8NGT2 312 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 ACTL9Q8TC94 416 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CALML6Q8TD86 181 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 SLC13A3Q8WWT9 602 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 SLCO2A1Q92959 643 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 TM4SF19Q96DZ7 209 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CLUHP3Q96NS8 147 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 DACH2Q96NX9 599 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PKP4Q99569 1192 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 FOXB1Q99853 325 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 MACROD1Q9BQ69 325 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HEMGNQ9BXL5 484 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 TTTY12Q9BZ98 90 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 LDAHQ9H6V9 325 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 CLK4Q9HAZ1 481 aaKnown RBP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 IL1RL2Q9HB29 575 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 FAM114A2Q9NRY5 505 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 DEPPQ9NTK1 212 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HPF1Q9NWY4 346 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 KCMF1Q9P0J7 381 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 FBXW2Q9UKT8 454 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 VWA7Q9Y334 891 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-229ENST00000554672 NAALAD2Q9Y3Q0 740 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 HYOU1Q9Y4L1 999 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 PCDHA3Q9Y5H8 950 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 GTF3C1Q12789 2109 aa4.45□□□□□ -1.7
ATXN3-229ENST00000554672 AKAP6Q13023 2319 aa4.44□□□□□ -1.7
ATXN3-229ENST00000554672 TRGV5A0A0B4J1U4 118 aa4.44□□□□□ -1.7
ATXN3-229ENST00000554672 TRBV11-1A0A0K0K1C0 115 aa4.44□□□□□ -1.7
ATXN3-229ENST00000554672 ATP6AP2A0A1C7CYW4 349 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms