RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 EFHD2Q96C19 240 aaPredicted RBP7.72□□□□□ -1.17
CHPT1-208ENST00000552215 SLC7A6OSQ96CW6 309 aaPredicted RBP7.72□□□□□ -1.17
CHPT1-208ENST00000552215 TCTN2Q96GX1 697 aa7.72□□□□□ -1.17
CHPT1-208ENST00000552215 SDR39U1Q9NRG7 319 aaPredicted RBP7.72□□□□□ -1.17
CHPT1-208ENST00000552215 CDC14AQ9UNH5 594 aa7.72□□□□□ -1.17
CHPT1-208ENST00000552215 PMS2P1A4D2B8 440 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 C17orf105B2RV13 164 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 H0YIV9 168 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 SCAMP2O15127 329 aaKnown RBP7.71□□□□□ -1.17
CHPT1-208ENST00000552215 PRKD3O94806 890 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 PRKACGP22612 351 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 TPP2P29144 1249 aaPredicted RBP7.71□□□□□ -1.17
CHPT1-208ENST00000552215 INHBCP55103 352 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 TAF11Q15544 211 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 FCRL6Q6DN72 434 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 PWWP2BQ6NUJ5 590 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 VN1R4Q7Z5H5 301 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.71□□□□□ -1.17
CHPT1-208ENST00000552215 UTP15Q8TED0 518 aaKnown RBP7.71□□□□□ -1.17
CHPT1-208ENST00000552215 ZUFSPQ96AP4 578 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 MESP1Q9BRJ9 268 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 CCDC90BQ9GZT6 254 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 PELI2Q9HAT8 420 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 DNAAF2Q9NVR5 837 aaKnown RBP7.71□□□□□ -1.17
CHPT1-208ENST00000552215 NLGN3Q9NZ94 848 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 LUZP4Q9P127 313 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 PDLIM1O00151 329 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 HMGN2P05204 90 aaKnown RBP7.71□□□□□ -1.17
CHPT1-208ENST00000552215 MATN1P21941 496 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 MASP1P48740 699 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 IST1P53990 364 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 EMP2P54851 167 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 PRR5P85299 388 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 REEP5Q00765 189 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 KLC1Q07866 573 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 HERC3Q15034 1050 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 SLC5A12Q1EHB4 618 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 HES3Q5TGS1 186 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 STPG1Q5TH74 334 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 SPRED1Q7Z699 444 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 VASH2Q86V25 355 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 TMEM151BQ8IW70 566 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 SLC15A3Q8IY34 581 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 TMEM156Q8N614 296 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 MFSD9Q8NBP5 474 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 OR4C6Q8NH72 309 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 MAGEE2Q8TD90 523 aaPredicted RBP7.71□□□□□ -1.17
CHPT1-208ENST00000552215 TM4SF18Q96CE8 201 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 CIB1Q99828 191 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 CHST8Q9H2A9 424 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 SLC6A13Q9NSD5 602 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 TAS2R9Q9NYW1 312 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 COPS7AQ9UBW8 275 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 POMT2Q9UKY4 750 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 LOXL2Q9Y4K0 774 aa7.71□□□□□ -1.17
CHPT1-208ENST00000552215 RALGAPA1Q6GYQ0 2036 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 A0A1W2PQM1 296 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 FGF17O60258 216 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 CLEC3AO75596 197 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 KRT75O95678 551 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 ITGA3P26006 1051 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 CSF2RBP32927 897 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 NR0B1P51843 470 aaKnown RBP7.71□□□□□ -1.18
CHPT1-208ENST00000552215 ARHGDIAP52565 204 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 NAA20P61599 178 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 SNRPNP63162 240 aaKnown RBP7.71□□□□□ -1.18
CHPT1-208ENST00000552215 MS4A2Q01362 244 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 COX20Q5RI15 118 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 GCNT6Q5T4J0 391 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 ARMC3Q5W041 872 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 RNF44Q7L0R7 432 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 MAML2Q8IZL2 1156 aaPredicted RBP7.71□□□□□ -1.18
CHPT1-208ENST00000552215 SAP25Q8TEE9 199 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 VCXQ9H320 206 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 EXO5Q9H790 373 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 ZIM2Q9NZV7 527 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 PCDHGA2Q9Y5H1 932 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 B3GALT1Q9Y5Z6 326 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 RTTNQ86VV8 2226 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 CXCR6O00574 342 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 NUDT21O43809 227 aaKnown RBP7.71□□□□□ -1.18
CHPT1-208ENST00000552215 CDC40O60508 579 aaKnown RBP eCLIP7.71□□□□□ -1.184e-9■□□□□ 11.1
CHPT1-208ENST00000552215 SOX30O94993 753 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 HNRNPFP52597 415 aaKnown RBP7.71□□□□□ -1.18
CHPT1-208ENST00000552215 ACY1Q03154 408 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 TARDBPQ13148 414 aaKnown RBP eCLIP7.71□□□□□ -1.18
CHPT1-208ENST00000552215 LANCL3Q6ZV70 420 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 RABEPKQ7Z6M1 372 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 GALNT12Q8IXK2 581 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 PGAM4Q8N0Y7 254 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 LRTOMTQ8WZ04 291 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 TBC1D20Q96BZ9 403 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 OR51I1Q9H343 314 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 ANGPTL2Q9UKU9 493 aa7.71□□□□□ -1.18
CHPT1-208ENST00000552215 NME4O00746 187 aa7.7□□□□□ -1.18
CHPT1-208ENST00000552215 HS6ST1O60243 411 aa7.7□□□□□ -1.18
CHPT1-208ENST00000552215 PCDHGA12O60330 932 aa7.7□□□□□ -1.18
CHPT1-208ENST00000552215 PORP16435 677 aaPredicted RBP7.7□□□□□ -1.18
CHPT1-208ENST00000552215 JAK1P23458 1154 aa7.7□□□□□ -1.18
CHPT1-208ENST00000552215 C6orf89Q6UWU4 347 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms