RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CKAP5Q14008 2032 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 PLXND1Q9Y4D7 1925 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 PRR19A6NJB7 356 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 H7BY64 318 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 TOR1BO14657 336 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 FFAR1O14842 300 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 B4GALT2O60909 372 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 KCNJ13O60928 360 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 SLITRK5O94991 958 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 FUCA1P04066 466 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 RPLP0P05388 317 aaKnown RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 BMP4P12644 408 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 OSMP13725 252 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 C5AR1P21730 350 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 ELAVL4P26378 380 aaKnown RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 PSMB5P28074 263 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 PKLRP30613 574 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 GJA4P35212 333 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 SLC15A1P46059 708 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 CD97P48960 835 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 ALDH9A1P49189 494 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 BCAP31P51572 246 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 SMIM11AP58511 58 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 HSPB3Q12988 150 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 RUNX3Q13761 415 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 CST6Q15828 149 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 INAQ16352 499 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 DUSP6Q16828 381 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 SPDYE7PQ495Y7 208 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 CYP27C1Q4G0S4 372 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 RPS26P11Q5JNZ5 115 aaPredicted RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 TMEM201Q5SNT2 666 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 OR4C11Q6IEV9 310 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 TNFAIP8L2Q6P589 184 aaPredicted RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 TUBA3EQ6PEY2 450 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 VITQ6UXI7 678 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 FAM46DQ8NEK8 389 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 KBTBD8Q8NFY9 601 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 OR2L8Q8NGY9 312 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 CREB3L4Q8TEY5 395 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 GTPBP3Q969Y2 492 aaKnown RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 SLC35G5Q96KT7 338 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 PRAP1Q96NZ9 151 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 TEFMQ96QE5 360 aaKnown RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 FUZQ9BT04 418 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 FAIM2Q9BWQ8 316 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 NXF2Q9GZY0 626 aaKnown RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 ABCG4Q9H172 646 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 DSN1Q9H410 356 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 FZD3Q9NPG1 666 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 PHPT1Q9NRX4 125 aaPredicted RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 TEX10Q9NXF1 929 aaPredicted RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 GPR83Q9NYM4 423 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 SELENONQ9NZV5 590 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 TMCC3Q9ULS5 477 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 KLK4Q9Y5K2 254 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 CFAP20Q9Y6A4 193 aaKnown RBP6.21□□□□□ -1.42
PTPRO-208ENST00000542557 MYO7AQ13402 2215 aa6.21□□□□□ -1.42
PTPRO-208ENST00000542557 FEZF1A0PJY2 475 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TMEM247A6NEH6 219 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 METTL15A6NJ78 407 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 MID1O15344 667 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 OR1F1O43749 312 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SERPINB7O75635 380 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 PTHP01270 115 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 GASTP01350 101 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 STSP08842 583 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ALOX5P09917 674 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 CD40LGP29965 261 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 CCT3P49368 545 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 NUDT6P53370 316 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SNRPGP62308 76 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 RPS26P62854 115 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ST3GAL4Q11206 333 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ILKQ13418 452 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 GPM6BQ13491 265 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 IRF4Q15306 451 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 MLF2Q15773 248 aaPredicted RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ZIC1Q15915 447 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SYT16Q17RD7 645 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TRIM16LQ309B1 348 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ZNF404Q494X3 552 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TMEM236Q5W0B7 351 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TCTN3Q6NUS6 607 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 C19orf48Q6RUI8 117 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 BTLAQ7Z6A9 289 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TP53I13Q8NBR0 393 aaPredicted RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 B3GNT7Q8NFL0 401 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 BBS10Q8TAM1 723 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SFXN5Q8TD22 340 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ITFG2Q969R8 447 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 EXOSC8Q96B26 276 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 C12orf66Q96MD2 445 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 INSM2Q96T92 566 aaPredicted RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SARGQ9BW04 601 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 UCK2Q9BZX2 261 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 RACGAP1Q9H0H5 632 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SERHL2Q9H4I8 314 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 BCL2L10Q9HD36 194 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms