RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 C9orf40Q8IXQ3 194 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TAGAPQ8N103 731 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 LRRC25Q8N386 305 aaPredicted RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 HSPBAP1Q96EW2 488 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 FBXL20Q96IG2 436 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 CAPZA3Q96KX2 299 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 GAL3ST4Q96RP7 486 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 PELOQ9BRX2 385 aaKnown RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 DOHHQ9BU89 302 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 DDX47Q9H0S4 455 aaKnown RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 SLC6A15Q9H2J7 730 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 RHOJQ9H4E5 214 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 GSX1Q9H4S2 264 aaPredicted RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 SH2D2AQ9NP31 389 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 DMRT3Q9NQL9 472 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 RTCAO00442 366 aaKnown RBP11.48□□□□□ -0.57
COPS7A-211ENST00000540408 FGF17O60258 216 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 OR10H2O60403 315 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 TRAPPC6AO75865 159 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 C1QAP02745 245 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 IGKV3-11P04433 115 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 EPXP11678 715 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ENDOUP21128 410 aaKnown RBP11.48□□□□□ -0.57
COPS7A-211ENST00000540408 TACR1P25103 407 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 GDF1P27539 372 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 RAP1GDS1P52306 607 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ATP6V0D1P61421 351 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 PDIA2Q13087 525 aaKnown RBP11.48□□□□□ -0.57
COPS7A-211ENST00000540408 DUSP8Q13202 625 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 FBXL19-AS1Q494R0 122 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 FBXO48Q5FWF7 155 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 OR4C11Q6IEV9 310 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ADNP2Q6IQ32 1131 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 MED27Q6P2C8 311 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 PAMR1Q6UXH9 720 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF793Q6ZN11 406 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 RNF111Q6ZNA4 994 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 UBE3DQ7Z6J8 389 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 BIVMQ86UB2 503 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 SPATA6LQ8N4H0 392 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 BBOF1Q8ND07 529 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 TNIP2Q8NFZ5 429 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF473Q8WTR7 871 aaKnown RBP11.48□□□□□ -0.57
COPS7A-211ENST00000540408 CDKL2Q92772 493 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ESAMQ96AP7 390 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 PPWD1Q96BP3 646 aaKnown RBP11.48□□□□□ -0.57
COPS7A-211ENST00000540408 CMTM7Q96FZ5 175 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF597Q96LX8 424 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 SH3GL2Q99962 352 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 TMEM79Q9BSE2 394 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 MS4A8Q9BY19 250 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 MOCS1Q9NZB8 636 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 ADGRE2Q9UHX3 823 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 PHF11Q9UIL8 331 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 CBLCQ9ULV8 474 aa11.48□□□□□ -0.57
COPS7A-211ENST00000540408 EML6Q6ZMW3 1958 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 ANKRD33BA6NCL7 494 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 OR6C76A6NM76 312 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 PRAMEF4O60810 478 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 SH3BGRLO75368 114 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 SCELO95171 688 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 SNX4O95219 450 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 GOSR1O95249 250 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 FBXO45P0C2W1 286 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 ALOX15P16050 662 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 STMN1P16949 149 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 IVDP26440 423 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 CEACAM8P31997 349 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 BUD31P41223 144 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 CASP2P42575 452 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 RPP38P78345 283 aaKnown RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 IGLV3-21P80748 117 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF267Q14586 743 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 DEFB113Q30KQ7 82 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 ACSF3Q4G176 576 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 PRAMEF9Q5VWM5 478 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 KHDRBS2Q5VWX1 349 aaKnown RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 HLA-DQA1Q5Y7H0 255 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 LYPD8Q6UX82 237 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 SEM1Q6ZVN7 128 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 GPR180Q86V85 440 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 LAS2Q8IYD9 372 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 ST13P4Q8IZP2 240 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 RELL2Q8NC24 303 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 FBXO36Q8NEA4 188 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 OR10G3Q8NGC4 313 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 DIO2Q92813 273 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 RIT1Q92963 219 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 RGMAQ96B86 450 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 TIMP4Q99727 224 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 CD244Q9BZW8 370 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 NEUROD4Q9HD90 331 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 DLL4Q9NR61 685 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 PTBP2Q9UKA9 531 aaKnown RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 RNF112Q9ULX5 631 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 SNX12Q9UMY4 172 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 RPH3AQ9Y2J0 694 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-211ENST00000540408 CHCHD2Q9Y6H1 151 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms