RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 ENPP4Q9Y6X5 453 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 CCDC88CQ9P219 2028 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 MDC1Q14676 2089 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 RANBP2P49792 3224 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 PRAMEF25A6NGN4 478 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 ERI3O43414 337 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 PRICKLE3O43900 615 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 GUCY1B2O75343 617 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 STATHP02808 62 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 IFNW1P05000 195 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 EPHA2P29317 976 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 PEBP1P30086 187 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 GPC1P35052 558 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 KRT20P35900 424 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 CCT3P49368 545 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 CLDN2P57739 230 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 ITGADQ13349 1161 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 TP53BP2Q13625 1128 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SLC9A5Q14940 896 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 MICAQ29983 383 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 ADPRMQ3LIE5 342 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 CYP27C1Q4G0S4 372 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 RPS26P11Q5JNZ5 115 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 NDUFAF5Q5TEU4 345 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 NIPAL1Q6NVV3 410 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 KIAA1324Q6UXG2 1013 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 ZNF793Q6ZN11 406 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 CCDC71Q8IV32 467 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 FBXL6Q8N531 539 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SLC5A8Q8N695 610 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 AMER3Q8N944 861 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 TMEM145Q8NBT3 493 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 OR52J3Q8NH60 311 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 PSMA8Q8TAA3 256 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SLC38A5Q8WUX1 472 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 OR1E3Q8WZA6 343 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 TMEM19Q96HH6 336 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SLC35G5Q96KT7 338 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 KCNC2Q96PR1 638 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SIGLEC11Q96RL6 698 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 KLHL31Q9H511 634 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 AKIP1Q9NQ31 210 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 CLDND1Q9NY35 253 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SPHK1Q9NYA1 384 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 AASSQ9UDR5 926 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SH3GLB1Q9Y371 365 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 SNX11Q9Y5W9 270 aa13.05□□□□□ -0.32
LDLRAD3-202ENST00000524419 TMEM247A6NEH6 219 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 POM121BA6NF01 834 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 A8MVJ9 347 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 ANHXE9PGG2 379 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 KPNA4O00629 521 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 AXIN1O15169 862 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 WBP4O75554 376 aaKnown RBP13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 DRD1P21728 446 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 PSMB9P28065 219 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 NDUFS1P28331 727 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 IDUAP35475 653 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 ARFIP1P53367 373 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 UBE2UQ5VVX9 321 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 MLIPQ5VWP3 458 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 ENPP7Q6UWV6 458 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 CCDC81Q6ZN84 652 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 TDHQ8IZJ6 230 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 MFSD9Q8NBP5 474 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 LCN9Q8WX39 176 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 JPH3Q8WXH2 748 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 FCGR1BQ92637 280 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 MS4A6EQ96DS6 147 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 WDR92Q96MX6 357 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 ZNF556Q9HAH1 456 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 SLC35C2Q9NQQ7 365 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 PLCXD1Q9NUJ7 323 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 SNX7Q9UNH6 387 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 PCDHGA6Q9Y5G7 932 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 PCDHGA2Q9Y5H1 932 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 PIAS3Q9Y6X2 628 aa13.04□□□□□ -0.32
LDLRAD3-202ENST00000524419 FUOMA2VDF0 154 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 OR2A25A4D2G3 310 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 ISM1B1AKI9 464 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 J3KTA2 159 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 PPM1DO15297 605 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 PCDHGA12O60330 932 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 MAN1A2O60476 641 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 FADS2O95864 444 aaKnown RBP13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 CHRM5P08912 532 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 RHCEP18577 417 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 HIST1H1TP22492 207 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 GGT2P36268 569 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 NCBP2P52298 156 aaKnown RBP eCLIP13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 MRPS21P82921 87 aaKnown RBP13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 HYAL2Q12891 473 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 SLAMF1Q13291 335 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 ATP1A4Q13733 1029 aa13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 SMN1Q16637 294 aaKnown RBP13.03□□□□□ -0.32
LDLRAD3-202ENST00000524419 ABHD17CQ6PCB6 329 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms