RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GTF2H2CQ6P1K8 395 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 HSDL2Q6YN16 418 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 CD163Q86VB7 1156 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 MYLK4Q86YV6 388 aaPredicted RBP12.15□□□□□ -0.46
DDX41-204ENST00000504807 TMEM132CQ8N3T6 1108 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 TMEM151AQ8N4L1 468 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 MORN4Q8NDC4 146 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 OR2M7Q8NG81 312 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 DCAKDQ8WVC6 231 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 SLC44A1Q8WWI5 657 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 CMTM7Q96FZ5 175 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 ENKD1Q9H0I2 346 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 DEFB127Q9H1M4 99 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 VPS11Q9H270 941 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 PROK2Q9HC23 129 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 MRPS33Q9Y291 106 aaKnown RBP12.15□□□□□ -0.46
DDX41-204ENST00000504807 CLCA3PQ9Y6N3 262 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
DDX41-204ENST00000504807 RTTNQ86VV8 2226 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 A0A088AWK7 358 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 H0YIV9 168 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 TFECO14948 347 aaPredicted RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 PROM1O43490 865 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 CDC40O60508 579 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX41-204ENST00000504807 GLSO94925 669 aaPredicted RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 GFAPP14136 432 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 FOSL1P15407 271 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 ABOP16442 354 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 TSPAN8P19075 237 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 ZNF10P21506 573 aaPredicted RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 SOX18P35713 384 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 STT3AP46977 705 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 DNASE1L1P49184 302 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 CASP6P55212 293 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 FOXO1Q12778 655 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 STX4Q12846 297 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 TRAF3Q13114 568 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 CPSF6Q16630 551 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX41-204ENST00000504807 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.14□□□□□ -0.47
DDX41-204ENST00000504807 AP5B1Q2VPB7 878 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 RELL1Q8IUW5 271 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 MMGT1Q8N4V1 131 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 PTGR2Q8N8N7 351 aaPredicted RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 L3MBTL4Q8NA19 623 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 FAM98AQ8NCA5 519 aaKnown RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 OR14A16Q8NHC5 309 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 TMEM125Q96AQ2 219 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 SENP5Q96HI0 755 aaPredicted RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 RPF2Q9H7B2 306 aaKnown RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 NOL11Q9H8H0 719 aaKnown RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 ACTR8Q9H981 624 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 SH2D2AQ9NP31 389 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 FARSBQ9NSD9 589 aaKnown RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 TEX10Q9NXF1 929 aaPredicted RBP12.14□□□□□ -0.47
DDX41-204ENST00000504807 XPR1Q9UBH6 696 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 PCTPQ9UKL6 214 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 TSC22D4Q9Y3Q8 395 aa12.14□□□□□ -0.47
DDX41-204ENST00000504807 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 A8MVJ9 347 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 CDK2AP1O14519 115 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 PGRMC2O15173 223 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 LRATO95237 230 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 AIFM1O95831 613 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 TUBB4AP04350 444 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 CT62P0C5K7 136 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 TNNI3P19429 210 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 TYK2P29597 1187 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 PIGAP37287 484 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 PIK3CBP42338 1070 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 SERPINB8P50452 374 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 CKAP4Q07065 602 aaKnown RBP12.13□□□□□ -0.47
DDX41-204ENST00000504807 ASPHQ12797 758 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 CEBPEQ15744 281 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 FAM83EQ2M2I3 478 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 ZNF791Q3KP31 576 aaPredicted RBP12.13□□□□□ -0.47
DDX41-204ENST00000504807 LIPJQ5W064 366 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 TMEM64Q6YI46 380 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 CHSY3Q70JA7 882 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 BIVMQ86UB2 503 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 GPR180Q86V85 440 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 ZCCHC7Q8N3Z6 543 aaKnown RBP12.13□□□□□ -0.47
DDX41-204ENST00000504807 ASB15Q8WXK1 588 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 DAZLQ92904 295 aaKnown RBP12.13□□□□□ -0.47
DDX41-204ENST00000504807 RGMAQ96B86 450 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 PHF21BQ96EK2 531 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 CCDC77Q9BR77 488 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 TTTY12Q9BZ98 90 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 ROGDIQ9GZN7 287 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 DDX31Q9H8H2 851 aaKnown RBP12.13□□□□□ -0.47
DDX41-204ENST00000504807 HPF1Q9NWY4 346 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 TUBA8Q9NY65 449 aaPredicted RBP12.13□□□□□ -0.47
DDX41-204ENST00000504807 ZNF225Q9UK10 706 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 ERVK-11Q9UQG0 969 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 NCKAP5O14513 1909 aa12.13□□□□□ -0.47
DDX41-204ENST00000504807 SYCE1LA8MT33 242 aa12.12□□□□□ -0.47
DDX41-204ENST00000504807 KLRC4-KLRK1H3BQV0 150 aa12.12□□□□□ -0.47
DDX41-204ENST00000504807 TPOP07202 933 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms