RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 COL5A3P25940 1745 aaPredicted RBP5.37□□□□□ -1.55
NEDD4-203ENST00000502612 BCORQ6W2J9 1755 aa5.37□□□□□ -1.55
NEDD4-203ENST00000502612 NUP98P52948 1817 aa5.37□□□□□ -1.55
NEDD4-203ENST00000502612 MAGEB16A2A368 324 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 TRIM64A6NGJ6 449 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 TRIM64BA6NI03 449 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 GOLGA6L19H0YKK7 550 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 JAK2O60674 1132 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 SOCS5O75159 536 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 RTN2O75298 545 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 BBOX1O75936 387 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 PPA1Q15181 289 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 ACKR1Q16570 336 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 FAM106AQ4KMX7 169 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 ATP1A1-AS1Q5TC04 95 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 KCTD11Q693B1 232 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 C15orf52Q6ZUT6 534 aaKnown RBP5.36□□□□□ -1.55
NEDD4-203ENST00000502612 ZNF248Q8NDW4 579 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 MGARPQ8TDB4 240 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 SEPT8Q92599 483 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 CLSTN2Q9H4D0 955 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 SELENOKQ9Y6D0 94 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 SCN7AQ01118 1682 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 NHSQ6T4R5 1651 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 MYH3P11055 1940 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 KIF26BQ2KJY2 2108 aa5.36□□□□□ -1.55
NEDD4-203ENST00000502612 THSD7AQ9UPZ6 1657 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 DUOX1Q9NRD9 1551 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 AFF2P51816 1311 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 SLC1A7O00341 560 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 DEXIO95424 95 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 CTDNEP1O95476 244 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 KIF5BP33176 963 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 CASP3P42574 277 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 SMSP52788 366 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 KIAA1024LP59773 190 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 AP1B1Q10567 949 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 MAPK11Q15759 364 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 STX1AQ16623 288 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 HFEQ30201 348 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 HLA-BQ31612 363 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 SBK1Q52WX2 424 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 CES4AQ5XG92 561 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 SLC27A4Q6P1M0 643 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 RBM43Q6ZSC3 357 aaKnown RBP5.35□□□□□ -1.55
NEDD4-203ENST00000502612 CLEC1AQ8NC01 280 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 ZNF519Q8TB69 540 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 CASP10Q92851 521 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 BPIFA2Q96DR5 249 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 OMA1Q96E52 524 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 ZNF300Q96RE9 604 aaPredicted RBP5.35□□□□□ -1.55
NEDD4-203ENST00000502612 MTIF3Q9H2K0 278 aaKnown RBP5.35□□□□□ -1.55
NEDD4-203ENST00000502612 LY9Q9HBG7 655 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 MID1IP1Q9NPA3 183 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 DNAJC11Q9NVH1 559 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 ANO10Q9NW15 660 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 PSORS1C1Q9UIG5 152 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 CSNK1G3Q9Y6M4 447 aa5.35□□□□□ -1.55
NEDD4-203ENST00000502612 SRRM4A7MD48 611 aaKnown RBP5.34□□□□□ -1.55
NEDD4-203ENST00000502612 NPIPB9F8W1W9 429 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 NXPH2O95156 264 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 NUDT17P0C025 328 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 ZSCAN5DPP0CG00 497 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 GYG1P46976 350 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 UCP2P55851 309 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 IRX4P78413 519 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 UBXN1Q04323 297 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 RPA4Q13156 261 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 RPS6KA1Q15418 735 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 SPANXN4Q5MJ08 99 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 PRSS42Q7Z5A4 293 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 TBC1D10CQ8IV04 446 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 SERPINA12Q8IW75 414 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 CNTN4Q8IWV2 1026 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 LINC00301Q8NCQ3 95 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 C11orf45Q8TAV5 145 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 CNRIP1Q96F85 164 aaPredicted RBP5.34□□□□□ -1.55
NEDD4-203ENST00000502612 ACAT2Q9BWD1 397 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 BARHL1Q9BZE3 327 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 C3orf14Q9HBI5 128 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 TXLNGQ9NUQ3 528 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 MDFICQ9P1T7 246 aa5.34□□□□□ -1.55
NEDD4-203ENST00000502612 TIAM2Q8IVF5 1701 aa5.34□□□□□ -1.56
NEDD4-203ENST00000502612 DDX60Q8IY21 1712 aaKnown RBP5.34□□□□□ -1.56
NEDD4-203ENST00000502612 SURF4O15260 269 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 SIGLEC5O15389 551 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 TLX2O43763 284 aaPredicted RBP5.33□□□□□ -1.56
NEDD4-203ENST00000502612 NEMFO60524 1076 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 SELEP16581 610 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 CMA1P23946 247 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 CTNNA2P26232 953 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 U2AF2P26368 475 aaKnown RBP eCLIP5.33□□□□□ -1.56
NEDD4-203ENST00000502612 HLA-FP30511 346 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 MECOMQ03112 1051 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 GRB14Q14449 540 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 FAM189A2Q15884 450 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 FUT11Q495W5 492 aa5.33□□□□□ -1.56
NEDD4-203ENST00000502612 GFI1BQ5VTD9 330 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms