RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZNF707Q96C28 371 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CCDC51Q96ER9 411 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SLC41A3Q96GZ6 507 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 URB1-AS1Q96HZ7 61 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 PLEKHG4BQ96PX9 1271 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 GFM1Q96RP9 751 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZNF559Q9BR84 538 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZSCAN5AQ9BUG6 496 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 TPPP3Q9BW30 176 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SLC2A11Q9BYW1 496 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MTMR12Q9C0I1 747 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 DDX47Q9H0S4 455 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 C10orf88Q9H8K7 445 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 FZD3Q9NPG1 666 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 GKN1Q9NS71 199 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 FAM207AQ9NSI2 230 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 NMRK1Q9NWW6 199 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 AATFQ9NY61 560 aaKnown RBP eCLIP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 KLHL9Q9P2J3 617 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 EPHA6Q9UF33 1036 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 FAM153AQ9UHL3 310 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ST6GALNAC2Q9UJ37 374 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 PACSIN3Q9UKS6 424 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ITM2BQ9Y287 266 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MFHAS1Q9Y4C4 1052 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 LOXL2Q9Y4K0 774 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 RIPK3Q9Y572 518 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ANGPTL3Q9Y5C1 460 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SNX9Q9Y5X1 595 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ARID2Q68CP9 1835 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 THADAQ6YHU6 1953 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 LAMA4Q16363 1823 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 A0A1W2PN81 502 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 DENND3A2RUS2 1198 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 RNF212BA8MTL3 300 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 E9PMD0 336 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 K7ESM1 405 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 SGK494L7N484 410 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 MPHOSPH10O00566 681 aaKnown RBP2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CHEK1O14757 476 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 TLX2O43763 284 aaPredicted RBP2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 SNX3O60493 162 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 TSC22D2O75157 780 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CRCPO75575 148 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 PDE9AO76083 593 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 STAG3L1P0CL83 205 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CT45A8P0DMV1 189 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CT45A9P0DMV2 189 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 PDHBP11177 359 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 NAGAP17050 411 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 UGT1A6P19224 532 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 HNRNPA2B1P22626 353 aaKnown RBP2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CBLP22681 906 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 IL4RP24394 825 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 ITGA3P26006 1051 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CERS1P27544 350 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 ARRB2P32121 409 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CHRNA7P36544 502 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 BTDP43251 543 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 DHPSP49366 369 aaPredicted RBP2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 SULT1E1P49888 294 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 TNFSF10P50591 281 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CCR4P51679 360 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 METAP1P53582 386 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 PGGT1BP53609 377 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 PROK1P58294 105 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 ID2Q02363 134 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 GABPAQ06546 454 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 GABPB1Q06547 395 aaPredicted RBP2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 SLC3A1Q07837 685 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CETN1Q12798 172 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 OVGP1Q12889 678 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 PPP1R8Q12972 351 aaKnown RBP2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 SRSF9Q13242 221 aaKnown RBP eCLIP2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 HNF4GQ14541 408 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZNF234Q14588 700 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 MEF2DQ14814 521 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 MAPK11Q15759 364 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 ACKR1Q16570 336 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 RBBP7Q16576 425 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CTF1Q16619 201 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 STX1AQ16623 288 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 NADK2Q4G0N4 442 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CAVIN4Q5BKX8 364 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 CT45A2Q5DJT8 189 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 SPDYCQ5MJ68 293 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 ELFN2Q5R3F8 820 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 C10orf25Q5T742 122 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 FAM46CQ5VWP2 391 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 PRAMEF7Q5VXH5 474 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 PM20D1Q6GTS8 502 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 KLC3Q6P597 504 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 LRRC8BQ6P9F7 803 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 MACC1Q6ZN28 852 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 Q6ZSV7 163 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 RUFY3Q7L099 469 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 RTN4RL2Q86UN3 420 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 STHQ8IWL8 128 aa2.24□□□□□ -2.05
CKS1BP2-201ENST00000497342 Q8N3U1 123 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms