RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 IGKV3-11P04433 115 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 HOXD4P09016 255 aaPredicted RBP14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 SPRP35270 261 aaPredicted RBP14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 CASP2P42575 452 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 STT3AP46977 705 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 RAP1GDS1P52306 607 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 RIPPLY3P57055 190 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 CALCOCO2Q13137 446 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 TBCCQ15814 346 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 ZNF791Q3KP31 576 aaPredicted RBP14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 CDKL4Q5MAI5 379 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 NDUFAF5Q5TEU4 345 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 BICRALQ6AI39 1079 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 B3GNT6Q6ZMB0 384 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 ACAD11Q709F0 780 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 CHSY3Q70JA7 882 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 WDR53Q7Z5U6 358 aaPredicted RBP14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 GPR180Q86V85 440 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 C17orf53Q8N3J3 647 aaPredicted RBP14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 STAG3L4Q8TBR4 150 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 CMTM7Q96FZ5 175 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 NUDT4Q9NZJ9 180 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 WHRNQ9P202 907 aa14.65□□□□□ -0.06
ERGIC3-217ENST00000488935 TRGV5A0A0B4J1U4 118 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 BCKDKO14874 412 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 TMPRSS11DO60235 418 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 KLK8O60259 260 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 MTHFD2P13995 350 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 HPDP32754 393 aaPredicted RBP14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 ZFP36L2P47974 494 aaKnown RBP14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 ART1P52961 327 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 KCNJ2P63252 427 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 IGLV3-21P80748 117 aaPredicted RBP14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 TMEM35AQ53FP2 167 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 C1orf185Q5T7R7 199 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 GRTP1Q5TC63 336 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 SLC22A10Q63ZE4 541 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 GRHL2Q6ISB3 625 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 GOLM1Q8NBJ4 401 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 BBOF1Q8ND07 529 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 SRFBP1Q8NEF9 429 aaKnown RBP14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 SPATA4Q8NEY3 305 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 OR8K3Q8NH51 312 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 RGMAQ96B86 450 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 RBM18Q96H35 190 aaKnown RBP14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 ROGDIQ9GZN7 287 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 SH2D2AQ9NP31 389 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 DMRT3Q9NQL9 472 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 RNF11Q9Y3C5 154 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 SPACA6W5XKT8 324 aa14.64□□□□□ -0.07
ERGIC3-217ENST00000488935 A0A1B0GVC2 190 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 A0A1W2PR48 441 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 LRRC3CA6NJW4 275 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 AQP7O14520 342 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 PGRMC2O15173 223 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 KERAO60938 352 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 SCELO95171 688 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 SIX3O95343 332 aaPredicted RBP14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 CLPSP04118 112 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 LTA4HP09960 611 aaKnown RBP14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 COX7A2P14406 83 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 ALOX15P16050 662 aaPredicted RBP14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 SSTR4P31391 388 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 MAGEA4P43358 317 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 TNFRSF17Q02223 184 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 CBLBQ13191 982 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 E2F2Q14209 437 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 CPSF6Q16630 551 aaKnown RBP eCLIP14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 PFKFB4Q16877 469 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 MPEG1Q2M385 716 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 MROH9Q5TGP6 573 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 ZDHHC24Q6UX98 284 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 RGS9BPQ6ZS82 235 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 SEM1Q6ZVN7 128 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 TBC1D1Q86TI0 1168 aaPredicted RBP14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 ZZZ3Q8IYH5 903 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 PRR22Q8IZ63 422 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 CENPLQ8N0S6 344 aaPredicted RBP14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 FBXO25Q8TCJ0 367 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 SGCZQ96LD1 299 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 CDK15Q96Q40 435 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 ZNF717Q9BY31 904 aaPredicted RBP14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 NMRAL1Q9HBL8 299 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 ZNF358Q9NW07 568 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 ANGPTL3Q9Y5C1 460 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 MTORP42345 2549 aa14.63□□□□□ -0.07
ERGIC3-217ENST00000488935 IQANK1A0A1B0GTG1 560 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 HMX2A2RU54 273 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 FAM187AA6NFU0 413 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 FIGNL2A6NMB9 653 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 PROM1O43490 865 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 OR10H2O60403 315 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 ZWINTO95229 277 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 CT62P0C5K7 136 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 EPB42P16452 691 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 DNAJA1P31689 397 aaKnown RBP14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 BSGP35613 385 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 IST1P53990 364 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 FBXW4P57775 412 aa14.62□□□□□ -0.07
ERGIC3-217ENST00000488935 UAP1Q16222 522 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms