RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CIDEBQ9UHD4 219 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 DCDC2Q9UHG0 476 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 SIX4Q9UIU6 781 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 ADAM28Q9UKQ2 775 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 FZD10Q9ULW2 581 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 SPATA2Q9UM82 520 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 AP3M1Q9Y2T2 418 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 ENTPD2Q9Y5L3 495 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 PUS1Q9Y606 427 aaKnown RBP eCLIP3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 V9GYQ6 96 aa3.83□□□□□ -1.8
PRPF38B-205ENST00000485810 SF3B1O75533 1304 aaKnown RBP eCLIP3.83□□□□□ -1.81e-5■■■□□ 15.9
PRPF38B-205ENST00000485810 A0A0A6YYC8 382 aaPredicted RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 A0A0A6YYH2 397 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 A0A0B4J293 547 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 A0A0G2JND7 137 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 TEX13CA0A0J9YWL9 993 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 A0A1W2PQ72 361 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 DPPA5A6NC42 116 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 MAGEA13PA6NCF6 341 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 FAM90A20PA6NIJ5 464 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 A6NJ64 397 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 HACD1B0YJ81 288 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 TRIM49D1C9J1S8 452 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 NPIPA2E9PIF3 369 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 I3L1I5 382 aaPredicted RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 COPEO14579 308 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC22A2O15244 555 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 HOXA3O43365 443 aaPredicted RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 HBP1O60381 514 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CCNT2O60583 730 aaKnown RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 VPS4BO75351 444 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 GPR32O75388 356 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 DNAJB5O75953 348 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PIGNO95427 931 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC16A8O95907 504 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PEX11BO96011 259 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 GSRP00390 522 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 VIPP01282 170 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PGK2P07205 417 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 BPGMP07738 259 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 RPS17P08708 135 aaKnown RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CD48P09326 243 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 IQCF3P0C7M6 154 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CCDC166P0CW27 439 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 MYL2P10916 166 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CYP4B1P13584 511 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 DPEP1P16444 411 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ADRA2CP18825 462 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 M6PRP20645 277 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 MALP21145 153 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 BGNP21810 368 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ACHEP22303 614 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ITGA3P26006 1051 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 SERPINB6P35237 376 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 HMGCLP35914 325 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 GJC1P36383 396 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 FDFT1P37268 417 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 MAGEA12P43365 314 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PTPN9P43378 593 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ALDH1A3P47895 512 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 NUMBP49757 651 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 SERPINH1P50454 418 aaKnown RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CCR4P51679 360 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PER3P56645 1201 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PRPS1P60891 318 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 HNRNPKP61978 463 aaKnown RBP eCLIP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 TFAMQ00059 246 aaKnown RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ROR2Q01974 943 aaKnown RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 MBTD1Q05BQ5 628 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CACNG1Q06432 222 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 MGAT2Q10469 447 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 BST1Q10588 318 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PPP1R8Q12972 351 aaKnown RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CTBP1Q13363 440 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PMS2P3Q13401 168 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 E2F2Q14209 437 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 RAB39AQ14964 217 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 SGCAQ16586 387 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 BEX5Q5H9J7 111 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 EOGTQ5NDL2 527 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 C6orf136Q5SQH8 315 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 C9orf50Q5SZB4 431 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ATF7IP2Q5U623 682 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF772Q68DY9 489 aaPredicted RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 KIAA0930Q6ICG6 404 aaPredicted RBP3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 OR52E8Q6IFG1 317 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC25A25Q6KCM7 469 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 TRNP1Q6NT89 227 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 LRRC74BQ6ZQY2 392 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CDHR3Q6ZTQ4 885 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF534Q76KX8 674 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 NDUFAF7Q7L592 441 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ADAMTSL2Q86TH1 951 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 UNC93AQ86WB7 457 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 TRIM69Q86WT6 500 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 PPP1R3BQ86XI6 285 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 CRLF3Q8IUI8 442 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 LYSMD2Q8IV50 215 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 MMP21Q8N119 569 aa3.82□□□□□ -1.8
PRPF38B-205ENST00000485810 ARHGAP18Q8N392 663 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms