RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 TRIM65Q6PJ69 517 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 METTL7BQ6UX53 244 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 IL17RELQ6ZVW7 336 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 SLC24A5Q71RS6 500 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 FCRLAQ7L513 359 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 SLC16A9Q7RTY1 509 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 MIER3Q7Z3K6 550 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 PIGZQ86VD9 579 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 THEM5Q8N1Q8 247 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 FAM89BQ8N5H3 189 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 RFT1Q96AA3 541 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 ULK4Q96C45 1275 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 FAM122AQ96E09 287 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 RASL10BQ96S79 203 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 RUFY1Q96T51 708 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 LPAR4Q99677 370 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 NKX3-1Q99801 234 aaPredicted RBP3.22□□□□□ -1.89
GTF3A-207ENST00000482655 FAM213AQ9BRX8 229 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 SPXQ9BT56 116 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 SLC39A8Q9C0K1 460 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 TDRD3Q9H7E2 651 aaKnown RBP3.22□□□□□ -1.89
GTF3A-207ENST00000482655 RAVER2Q9HCJ3 691 aaKnown RBP3.22□□□□□ -1.89
GTF3A-207ENST00000482655 CD209Q9NNX6 404 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 ZNF71Q9NQZ8 489 aaPredicted RBP3.22□□□□□ -1.89
GTF3A-207ENST00000482655 INTS9Q9NV88 658 aaKnown RBP3.22□□□□□ -1.89
GTF3A-207ENST00000482655 TBC1D13Q9NVG8 400 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 DNAJC11Q9NVH1 559 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 ANO10Q9NW15 660 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 APPL1Q9UKG1 709 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 EXOC6BQ9Y2D4 811 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 ZNF510Q9Y2H8 683 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 RLFQ13129 1914 aa3.22□□□□□ -1.89
GTF3A-207ENST00000482655 MYH3P11055 1940 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 A0A087X0K7 114 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 TRBV5-5A0A0J9YX44 114 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 RNF103-CHMP3A0A140T963 221 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 RNF103O00237 685 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PDHXO00330 501 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 DCXO43602 365 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 ATP6V1G1O75348 118 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 NME6O75414 186 aaPredicted RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 CLN5O75503 358 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 GSTA2P09210 222 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 FRMD6-AS1P0C7T7 363 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 CCDC192P0DO97 292 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 DLATP10515 647 aaKnown RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 GOT1P17174 413 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 RBMS1P29558 406 aaKnown RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PPP2R1AP30153 589 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 NF2P35240 595 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 SLC6A12P48065 614 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 GALK2Q01415 458 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 WASHC5Q12768 1159 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 TTC31Q49AM3 519 aaPredicted RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 XKR6Q5GH73 641 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 XKR3Q5GH77 459 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 SLC25A53Q5H9E4 307 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 TATDN1Q6P1N9 297 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 RABEPKQ7Z6M1 372 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 ZNF410Q86VK4 478 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 CNTN4Q8IWV2 1026 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 ZNF440Q8IYI8 595 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 TMEM99Q8N816 258 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 ZNF614Q8N883 585 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 LRTM2Q8N967 370 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 SMYD1Q8NB12 490 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 TMEM178AQ8NBL3 297 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 RNF149Q8NC42 400 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 RAET1EQ8TD07 263 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 RBM41Q96IZ5 413 aaKnown RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 VGLL1Q99990 258 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PI4K2AQ9BTU6 479 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 COA1Q9GZY4 146 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 SHARPINQ9H0F6 387 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 P2RY12Q9H244 342 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 MAGEF1Q9HAY2 307 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PRMT8Q9NR22 394 aaPredicted RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 ZCCHC3Q9NUD5 404 aaKnown RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PLCXD1Q9NUJ7 323 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 CYP39A1Q9NYL5 469 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PAK5Q9P286 719 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 PRDM4Q9UKN5 801 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 ELF5Q9UKW6 265 aaPredicted RBP3.21□□□□□ -1.9
GTF3A-207ENST00000482655 SELENOKQ9Y6D0 94 aa3.21□□□□□ -1.9
GTF3A-207ENST00000482655 SMCHD1A6NHR9 2005 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 MYO3BQ8WXR4 1341 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 TRBV2A0A0J9YWF9 115 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 A0A1B0GVY2 172 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 ANKDD1BA6NHY2 528 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 KRTAP16-1A8MUX0 517 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 A8MVM7 634 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 TCP10L2B9ZVM9 353 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 H3BMM5 538 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 CCL24O00175 119 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 FPGTO14772 594 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 VEGFDO43915 354 aa3.2□□□□□ -1.9
GTF3A-207ENST00000482655 CDC123O75794 336 aaPredicted RBP3.2□□□□□ -1.9
GTF3A-207ENST00000482655 BCAS2O75934 225 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms