RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 PIPSLA2A3N6 862 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 TMEM238C9JI98 176 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 CEACAM1P13688 526 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 EIF2AK2P19525 551 aaKnown RBP7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 ITGAXP20702 1163 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 PRKCHP24723 683 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 PTPN7P35236 360 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 DLSTP36957 453 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 TMBIM6P55061 237 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 MLLT10P55197 1068 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 SIM1P81133 766 aaPredicted RBP7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 SLC6A3Q01959 620 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 SLC18A2Q05940 514 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 CDH17Q12864 832 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 AP5B1Q2VPB7 878 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 CATSPEREQ5SY80 951 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 UNQ6494/PRO21346Q6UXR6 183 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 PLEKHG7Q6ZR37 379 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 ZNF280BQ86YH2 543 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 FAM89BQ8N5H3 189 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 FAM71CQ8NEG0 241 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 SH3YL1Q96HL8 342 aaPredicted RBP7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 ZNF668Q96K58 619 aaPredicted RBP7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 SENP8Q96LD8 212 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 HINT2Q9BX68 163 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 OR2AG1Q9H205 316 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 HRH4Q9H3N8 390 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 GPN2Q9H9Y4 310 aaPredicted RBP7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 CPNE5Q9HCH3 593 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 KLQ9UEF7 1012 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 FBXL7Q9UJT9 491 aa7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 MRPS33Q9Y291 106 aaKnown RBP7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 WBP11Q9Y2W2 641 aaKnown RBP7.3□□□□□ -1.24
SPTBN1-204ENST00000467371 SNED1Q8TER0 1413 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 A0A1W2PRX2 142 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 CLDN25C9JDP6 229 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 LRRN3E7EW58 273 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 POC1B-GALNT4F8VUJ3 575 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 MAN2B1O00754 1011 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 PLRG1O43660 514 aaKnown RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 LRCH4O75427 683 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 BMP3P12645 472 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 BGNP21810 368 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 GSTM2P28161 218 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 SLC6A9P48067 706 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 IFITM3Q01628 133 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 CSTF1Q05048 431 aaKnown RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 POU6F1Q14863 301 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 CA9Q16790 459 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 DPY19L1Q2PZI1 675 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ATG9BQ674R7 924 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 DLEU7Q6UYE1 221 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 DEFB132Q7Z7B7 95 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 CATSPERDQ86XM0 798 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 MRPL41Q8IXM3 137 aaKnown RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 NAGSQ8N159 534 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 REPS1Q96D71 796 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 SLC46A1Q96NT5 459 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 AMNQ9BXJ7 453 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 LRRN3Q9H3W5 708 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ACP6Q9NPH0 428 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ATP13A2Q9NQ11 1180 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ZNF701Q9NV72 531 aaPredicted RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 SNX7Q9UNH6 387 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 MGAT4BQ9UQ53 548 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 MRPS18BQ9Y676 258 aaKnown RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 COL14A1Q05707 1796 aaKnown RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 PCP4L1A6NKN8 68 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 H7C0C1 242 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 FGF5P12034 268 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 COX7A2P14406 83 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 MSH3P20585 1137 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 COMTP21964 271 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 KLRC2P26717 231 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 GJC1P36383 396 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 CD79BP40259 229 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 NDUFV1P49821 464 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 RAB39AQ14964 217 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 GPR19Q15760 415 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 C5orf64Q2M2E5 130 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 UGT3A1Q6NUS8 523 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 LIPIQ6XZB0 460 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 CENPVQ7Z7K6 275 aaPredicted RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 OR10H4Q8NGA5 316 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 MARVELD3Q96A59 401 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 LRR1Q96L50 414 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 KLHL15Q96M94 604 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 MMP27Q9H306 513 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 NSUN3Q9H649 340 aaKnown RBP7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 STMN3Q9NZ72 180 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 TESMINQ9Y4I5 508 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 PCDHA2Q9Y5H9 948 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ATRNL1Q5VV63 1379 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 CCRL2O00421 344 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ZNF208O43345 1280 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ATG13O75143 517 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 UPK3AO75631 287 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 GLDCP23378 1020 aa7.29□□□□□ -1.24
SPTBN1-204ENST00000467371 SUOXP51687 545 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms