RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PAPD4Q6PIY7 484 aaKnown RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 RIPOR1Q6ZS17 1223 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 MMP21Q8N119 569 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 C7orf57Q8NEG2 295 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 M1APQ8TC57 530 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PTPMT1Q8WUK0 201 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 LPAR4Q99677 370 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 NUDT9Q9BW91 350 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 EBPLQ9BY08 206 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 WDR41Q9HAD4 459 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PNO1Q9NRX1 252 aaKnown RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 RIC8BQ9NVN3 520 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 HEY2Q9UBP5 337 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 TUBD1Q9UJT1 453 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PPIEQ9UNP9 301 aaKnown RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 DLGAP4Q9Y2H0 992 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 POLR3HQ9Y535 204 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PCDHGA9Q9Y5G4 932 aaKnown RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 ATP6AP2A0A1C7CYW4 349 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 GNG14A0A1W2PPG7 69 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 A0A1W2PS29 197 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 C1orf226A1L170 272 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SYNDIG1LA6NDD5 238 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SAGE2PA6NJ88 616 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 B8ZZF3 427 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 MKRN2OSH3BPM6 223 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 K7EM74 188 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SLC28A2O43868 658 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SKAP2O75563 359 aaPredicted RBP9.39□□□□□ -0.91
ATG4A-206ENST00000457035 ATP6AP2O75787 350 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 PDGFAP04085 211 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 IL3P08700 152 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 DRD2P14416 443 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 NR1D1P20393 614 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 TACR1P25103 407 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 ITGA3P26006 1051 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 GSTM5P46439 218 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SLC26A5P58743 744 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 KCNAB2Q13303 367 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 MYBPC3Q14896 1274 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 NR6A1Q15406 480 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 TERF2Q15554 542 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 EXT1Q16394 746 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 C6orf136Q5SQH8 315 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 OR52E8Q6IFG1 317 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 FAM71E1Q6IPT2 247 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 TCTN3Q6NUS6 607 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 H3F3CQ6NXT2 135 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SLC48A1Q6P1K1 146 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 KBTBD2Q8IY47 623 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 KIRREL3Q8IZU9 778 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 OR4K14Q8NGD5 310 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 ELP5Q8TE02 316 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 CKAP2Q8WWK9 683 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 THOC3Q96J01 351 aaKnown RBP9.39□□□□□ -0.91
ATG4A-206ENST00000457035 EGLN2Q96KS0 407 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 PPP3R2Q96LZ3 170 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SMAD5Q99717 465 aaKnown RBP9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SLC25A23Q9BV35 468 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 LHPPQ9H008 270 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 MMP25Q9NPA2 562 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 ADAP2Q9NPF8 381 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 INTS9Q9NV88 658 aaKnown RBP9.39□□□□□ -0.91
ATG4A-206ENST00000457035 C5AR2Q9P296 337 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 GIMAP2Q9UG22 337 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 EXO1Q9UQ84 846 aaKnown RBP9.39□□□□□ -0.91
ATG4A-206ENST00000457035 WBP11Q9Y2W2 641 aaKnown RBP9.39□□□□□ -0.91
ATG4A-206ENST00000457035 TMED5Q9Y3A6 229 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 SETXQ7Z333 2677 aaKnown RBP9.39□□□□□ -0.91
ATG4A-206ENST00000457035 TENM4Q6N022 2769 aa9.39□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF195O14628 629 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PEX11AO75192 247 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 MYO1DO94832 1006 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 DDAH2O95865 285 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 IFNA16P05015 189 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 SLC35E2P0CK97 266 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ITGAMP11215 1152 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 SFTPCP11686 197 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 BCKDHAP12694 445 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ALOX15P16050 662 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PIK3R1P27986 724 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 GALNSP34059 522 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 STT3AP46977 705 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 XKP51811 444 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 HK2P52789 917 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF763Q0D2J5 394 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 C2orf80Q0P641 193 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 RAPSNQ13702 412 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 HEPACAMQ14CZ8 416 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ELAVL1Q15717 326 aaKnown RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PDCD2Q16342 344 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PRSS53Q2L4Q9 553 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 BTBD16Q32M84 506 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF750Q32MQ0 723 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 GALNTL6Q49A17 601 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 JMJD6Q6NYC1 403 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms