RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TRA2BP62995 288 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 HSPB3Q12988 150 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 FGL2Q14314 439 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 IRF3Q14653 427 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 MLC1Q15049 377 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 C1QTNF12Q5T7M4 302 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 CACUL1Q86Y37 369 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 RAB8BQ92930 207 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 ZBED6CLQ96FA7 236 aaPredicted RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 CAMK1GQ96NX5 476 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 SERHL2Q9H4I8 314 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 WDR26Q9H7D7 661 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 GPR83Q9NYM4 423 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 ENOPH1Q9UHY7 261 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 DUSP12Q9UNI6 340 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 A0A0A6YYD5 115 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 IGKV1-8A0A0C4DH67 115 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 EFCAB9A8MZ26 197 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 CLEC3AO75596 197 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 STSP08842 583 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 GSTT2P0CG29 244 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 GSTT2BP0CG30 244 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 PRDX1Q06830 199 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 SYT16Q17RD7 645 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 COLEC12Q5KU26 742 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 OR4C11Q6IEV9 310 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 PLD3Q8IV08 490 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 TP53I13Q8NBR0 393 aaPredicted RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 TEFMQ96QE5 360 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 PLA2G2FQ9BZM2 168 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 SLIRPQ9GZT3 109 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 POLE4Q9NR33 117 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 ZFR2Q9UPR6 939 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 DSPPQ9NZW4 1301 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 NUMA1Q14980 2115 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 ATG2AQ2TAZ0 1938 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 SEMA7AO75326 666 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 ACP5P13686 325 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 UGT2B10P36537 528 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 TGFBR1P36897 503 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 CRISP1P54107 249 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 TIGD6Q17RP2 521 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 SPDYE7PQ495Y7 208 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 FRMPD2BQ6IN97 320 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 SLC22A16Q86VW1 577 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 OR2A1Q8NGT9 310 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 DHRS1Q96LJ7 313 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 C12orf66Q96MD2 445 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 COL21A1Q96P44 957 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 IMPAD1Q9NX62 359 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 REV3LO60673 3130 aa17.42■□□□□ 0.38
SEMA3B-209ENST00000456560 TRBV4-1A0A0J9YWV2 114 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 M0R129 80 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 CACNB4O00305 520 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 PDE9AO76083 593 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 CHMP24386 653 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 KCNJ5P48544 419 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 CCT3P49368 545 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 SLC46A3Q7Z3Q1 461 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 SLC44A2Q8IWA5 706 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 NLGN4XQ8N0W4 816 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 HDDC3Q8N4P3 179 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 XKR8Q9H6D3 395 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 TRANK1O15050 2925 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 DOCK9Q9BZ29 2069 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 PRAMEF27A3QJZ7 478 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 PRR19A6NJB7 356 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 PPM1DO15297 605 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 C5AR1P21730 350 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 EIF2DP41214 584 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 CTSKP43235 329 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 RAB28P51157 221 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 CDC42P60953 191 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 ST3GAL4Q11206 333 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 ZIC1Q15915 447 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 TCTN3Q6NUS6 607 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 RAB42Q8N4Z0 105 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 ZHX1-C8orf76Q96EF9 292 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 TIMM29Q9BSF4 260 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 DPH7Q9BTV6 452 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 PBX4Q9BYU1 374 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 PHPT1Q9NRX4 125 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 MS4A12Q9NXJ0 267 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 SCHIP1Q9P0W5 487 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 ANKMY1Q9P2S6 941 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 REV1Q9UBZ9 1251 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 ZNF229Q9UJW7 825 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 PNMA8BQ9ULN7 279 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 HEATR5BQ9P2D3 2071 aa17.41■□□□□ 0.38
SEMA3B-209ENST00000456560 SH3D21A4FU49 640 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 LRIT2A6NDA9 550 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 FAM227AF5H4B4 570 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 PAK4O96013 591 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ADH1BP00325 375 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 DRD2P14416 443 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 PKLRP30613 574 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ERVK-21P61565 698 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ZNF793Q6ZN11 406 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms