RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 OR4C15Q8NGM1 316 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 LHFPL5Q8TAF8 219 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GIMAP1Q8WWP7 306 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 DEDD2Q8WXF8 326 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 FAM162AQ96A26 154 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 AP2M1Q96CW1 435 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 MYEOVQ96EZ4 313 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ZNF668Q96K58 619 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PPP3R2Q96LZ3 170 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TBATAQ96M53 351 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 Q96MT0 163 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GPR137Q96N19 417 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TRNT1Q96Q11 434 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 EPYCQ99645 322 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 COPS4Q9BT78 406 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CPEB1Q9BZB8 566 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ARHGAP39Q9C0H5 1083 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SLC22A4Q9H015 551 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RACGAP1Q9H0H5 632 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TKTL2Q9H0I9 626 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 KCNN2Q9H2S1 579 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 MIXL1Q9H2W2 232 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SERHL2Q9H4I8 314 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 NARFLQ9H6Q4 476 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 WDCPQ9H6R7 721 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SYNDIG1Q9H7V2 258 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RNF121Q9H920 327 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 AS3MTQ9HBK9 375 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CSNK1G1Q9HCP0 422 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 FZD3Q9NPG1 666 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SEMA4BQ9NPR2 832 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SLC6A13Q9NSD5 602 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 OLA1Q9NTK5 396 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 DDX28Q9NUL7 540 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TRMT13Q9NUP7 481 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TMEM30AQ9NV96 361 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RBM22Q9NW64 420 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 C14orf119Q9NWQ9 140 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 DDIT4Q9NX09 232 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 MRPL39Q9NYK5 338 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CNOT2Q9NZN8 540 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SH3BP4Q9P0V3 963 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SPASTQ9UBP0 616 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TMPRSS11EQ9UL52 423 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TMCC3Q9ULS5 477 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SAMD4AQ9UPU9 718 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SPEF1Q9Y4P9 236 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PCDHGA2Q9Y5H1 932 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RNF215Q9Y6U7 377 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GREB1Q4ZG55 1949 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SYNJ2BP-COX16A0A087WUM0 186 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SMIM28A0A1B0GU29 152 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 A0A1W2PQ72 361 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 RPS10-NUDT3A0A1W2PQS6 291 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 OR51F1A6NGY5 319 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 A8MV72 311 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SUPT3HB4E1H0 165 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 NT5C1B-RDH14C9J2C7 533 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 ZNF670-ZNF695F2Z2N8 137 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 LEFTY2O00292 366 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CLDN5O00501 218 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SLC9A3R1O14745 358 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 IRAK2O43187 625 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 PROM1O43490 865 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SLC43A1O75387 559 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SLC22A5O76082 557 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 LY86O95711 162 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 GLP2RO95838 553 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CAPN1P07384 714 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 STSP08842 583 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CYP4B1P13584 511 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 GYPEP15421 78 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 GPX2P18283 190 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CBLP22681 906 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 PRPH2P23942 346 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 MYL9P24844 172 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 PTBP1P26599 531 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 AKT1P31749 480 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SOX6P35712 828 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 ARL1P40616 181 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CASP2P42575 452 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CRYBB2P43320 205 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 TAF6P49848 677 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CLCN4P51793 760 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 ZNF140P52738 457 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CRYBA2P53672 197 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CRISP3P54108 245 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CLDN8P56748 225 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CLDN20P56880 219 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SRP54P61011 504 aaKnown RBP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 VLDLRP98155 873 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 SCN1BQ07699 218 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 MGAT3Q09327 533 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 MTAPQ13126 283 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 MAD2L1Q13257 205 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 PCBP1Q15365 356 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 CSRP2Q16527 193 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 MAPKAPK3Q16644 382 aa3.94□□□□□ -1.78
HMGB3P22-202ENST00000451823 AP5B1Q2VPB7 878 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms