RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 FAM53CQ9NYF3 392 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 ZIM2Q9NZV7 527 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 PHF11Q9UIL8 331 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 PPIL1Q9Y3C6 166 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 ATRXP46100 2492 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 MIA3Q5JRA6 1907 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 ARNTLO00327 626 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 OR6A2O95222 327 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 T-ENOLP0DO92 83 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 CCL4P13236 92 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 DGCR6Q14129 220 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 BLOC1S3Q6QNY0 202 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 ANKRD53Q8N9V6 530 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 GLB1L3Q8NCI6 653 aaPredicted RBP12.82□□□□□ -0.36
DDR1-225ENST00000376568 OR56A3Q8NH54 315 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 C5orf34Q96MH7 638 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 CCT7Q99832 543 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.82□□□□□ -0.364e-8■■■□□ 16
DDR1-225ENST00000376568 RNPEPL1Q9HAU8 725 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 APMAPQ9HDC9 416 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 TMEM9BQ9NQ34 198 aa12.82□□□□□ -0.36
DDR1-225ENST00000376568 RPH3AQ9Y2J0 694 aaPredicted RBP12.82□□□□□ -0.36
DDR1-225ENST00000376568 NME1P15531 152 aaKnown RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 SSTR4P31391 388 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 ITGA1P56199 1179 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 MS4A2Q01362 244 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 CHAF1BQ13112 559 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 TNFAIP8L3Q5GJ75 292 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 TMPRSS9Q7Z410 1059 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 DCP2Q8IU60 420 aaKnown RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 ARMC8Q8IUR7 673 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 ARL10Q8N8L6 244 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 IPCEF1Q8WWN9 437 aaPredicted RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 GAB3Q8WWW8 586 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 SLC7A6OSQ96CW6 309 aaPredicted RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 ADOQ96SZ5 270 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 NKX1-2Q9UD57 310 aaPredicted RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 DNMT3AQ9Y6K1 912 aaPredicted RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 SLC25A12O75746 678 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 IL12AP29459 219 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 PKLRP30613 574 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 ZNF311Q5JNZ3 666 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 ATG9BQ674R7 924 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 ZNF730Q6ZMV8 503 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 LINC00696Q6ZRV3 163 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 ZNF304Q9HCX3 659 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 TRBC2A0A5B9 178 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 HCRTR2O43614 444 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 CTSBP07858 339 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 PEPDP12955 493 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 CPMP14384 443 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 PORP16435 677 aaPredicted RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 JAK1P23458 1154 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 GRK6P43250 576 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 CLDN8P56748 225 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 HSD11B2P80365 405 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 CDK20Q8IZL9 346 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 LRRC25Q8N386 305 aaPredicted RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 ZNF282Q9UDV7 671 aaPredicted RBP12.81□□□□□ -0.36
DDR1-225ENST00000376568 SNX5Q9Y5X3 404 aa12.81□□□□□ -0.36
DDR1-225ENST00000376568 A0A1W2PS29 197 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 WFS1O76024 890 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 ATP5A1P25705 553 aaKnown RBP12.8□□□□□ -0.36
DDR1-225ENST00000376568 NXPH1P58417 271 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 RPS15P62841 145 aaKnown RBP12.8□□□□□ -0.36
DDR1-225ENST00000376568 TOP3AQ13472 1001 aaPredicted RBP12.8□□□□□ -0.36
DDR1-225ENST00000376568 SLC5A12Q1EHB4 618 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 PRAMEF20Q5VT98 475 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 C16orf47Q6ZP98 133 aaPredicted RBP12.8□□□□□ -0.36
DDR1-225ENST00000376568 SLC29A4Q7RTT9 530 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 KIAA0907Q7Z7F0 614 aaPredicted RBP12.8□□□□□ -0.36
DDR1-225ENST00000376568 TSLPQ969D9 159 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 MYCBPQ99417 103 aaPredicted RBP12.8□□□□□ -0.36
DDR1-225ENST00000376568 KLHL4Q9C0H6 718 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 SLC6A20Q9NP91 592 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 SCOCQ9UIL1 159 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 ENTPD2Q9Y5L3 495 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 NME4O00746 187 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 PLD2O14939 933 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 GKN3PP0CG01 181 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 SPINK2P20155 84 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 GNA13Q14344 377 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 RAB11FIP2Q7L804 512 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 LNX2Q8N448 690 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 ZSCAN32Q9NX65 697 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 GPR89AB7ZAQ6 455 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 PRAMEF4O60810 478 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 ERN1O75460 977 aaKnown RBP12.8□□□□□ -0.36
DDR1-225ENST00000376568 FGF4P08620 206 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 GPR89BP0CG08 455 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 MLLT10P55197 1068 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 KLC1Q07866 573 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 HERC3Q15034 1050 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 COLEC12Q5KU26 742 aa12.8□□□□□ -0.36
DDR1-225ENST00000376568 C6orf52Q5T4I8 152 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms