RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CDKL4Q5MAI5 379 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF569Q5MCW4 686 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 TEDDM1Q5T9Z0 273 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 MLIPQ5VWP3 458 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM91A1Q658Y4 838 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 LRRC66Q68CR7 880 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 KIAA0930Q6ICG6 404 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CCDC137Q6PK04 289 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 NHLRC1Q6VVB1 395 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 GPRIN3Q6ZVF9 776 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 TMEM179Q6ZVK1 233 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ANO5Q75V66 913 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 PARS2Q7L3T8 475 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ADAMTSL2Q86TH1 951 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 YRDCQ86U90 279 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 TBC1D10CQ8IV04 446 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ARHGAP12Q8IWW6 846 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 RDM1Q8NG50 284 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 OR10Z1Q8NGY1 313 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 DNASE1L2Q92874 299 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 MIB2Q96AX9 1013 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 DAZAP1Q96EP5 407 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 DTD2Q96FN9 168 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 REXO5Q96IC2 774 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SERAC1Q96JX3 654 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 PBKQ96KB5 322 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 PRRC1Q96M27 445 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 LRFN5Q96NI6 719 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SRSF8Q9BRL6 282 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ALG8Q9BVK2 526 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 POTEKPQ9BYX7 375 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 FRMD8Q9BZ67 464 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 DERL2Q9GZP9 239 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 FBXO44Q9H4M3 255 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 FN3KRPQ9HA64 309 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SAP30LQ9HAJ7 183 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC38A10Q9HBR0 1119 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 MRPS30Q9NP92 439 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 BATF3Q9NR55 127 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 THAP1Q9NVV9 213 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 RBAKQ9NYW8 714 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 PTGFRNQ9P2B2 879 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SERGEFQ9UGK8 458 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CHRNA9Q9UGM1 479 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CIDEBQ9UHD4 219 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ENPP5Q9UJA9 477 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 RAB21Q9UL25 225 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 RAB23Q9ULC3 237 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SPATA2Q9UM82 520 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SH3GLB1Q9Y371 365 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 LRRC42Q9Y546 428 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CACNA1EQ15878 2313 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 COL6A6A6NMZ7 2263 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 URB1O60287 2271 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 A0A0B4J293 547 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 EDDM13A0A1B0GTR0 161 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 KANSL1LA0AUZ9 987 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SHISA7A6NL88 538 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 LINC00473A8K010 186 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 AP4M1O00189 453 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SCAMP2O15127 329 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CHADO15335 359 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 NKX2-8O15522 239 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 AP5Z1O43299 807 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 HBP1O60381 514 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 JAK2O60674 1132 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 USP12O75317 370 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 RNF8O76064 485 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SNAPINO95295 136 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 RAB3DO95716 219 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 BAG3O95817 575 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC16A8O95907 504 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 GNSP15586 552 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CREB1P16220 341 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CD72P21854 359 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 YWHABP31946 246 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SERPINB6P35237 376 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SERPINB9P50453 376 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 RAP1GDS1P52306 607 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 RIPPLY3P57055 190 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 FOXL2P58012 376 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 NANOS3P60323 173 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PRPS1P60891 318 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SRP54P61011 504 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 RAB4BP61018 213 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PSG6Q00889 435 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 BNC1Q01954 994 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CACNG1Q06432 222 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SPOCK1Q08629 439 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 IFFO1Q0D2I5 559 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 DMP1Q13316 513 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 DNASE1L3Q13609 305 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PDK3Q15120 406 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 TPD52L1Q16890 204 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 HSDL1Q3SXM5 330 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 TEX44Q53QW1 395 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 EOGTQ5NDL2 527 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms