RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TECPR2O15040 1411 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 TUBAL3A6NHL2 446 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF487B1APH4 448 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 ADAM12O43184 909 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 SOX30O94993 753 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 RPP14O95059 124 aaKnown RBP5.84□□□□□ -1.48
VPS13B-203ENST00000358544 CPNE6O95741 557 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 IDUAP35475 653 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 SSR2P43308 183 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 SELENBP1Q13228 472 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 PPIGQ13427 754 aaKnown RBP eCLIP5.84□□□□□ -1.482e-6■■■□□ 15.1
VPS13B-203ENST00000358544 NUDT18Q6ZVK8 323 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 SERPINA9Q86WD7 417 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 OR2A12Q8NGT7 310 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 HMCESQ96FZ2 354 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 SAGE1Q9NXZ1 904 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 LRRTM2O43300 516 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 RDH16O75452 317 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 S100A8P05109 93 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 LAMP2P13473 410 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 MTNR1AP48039 350 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SNTB2Q13425 540 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DNAJC22Q8N4W6 341 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 LMO3Q8TAP4 145 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 C12orf57Q99622 126 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GSX2Q9BZM3 304 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GXYLT2A0PJZ3 443 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF705GA8MUZ8 300 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SSX4O60224 188 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF254O75437 659 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PRKCAP17252 672 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SYN1P17600 705 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PER3P56645 1201 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ILF3Q12906 894 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 INAVAQ3KP66 663 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 FAM46CQ5VWP2 391 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CLEC4CQ8WTT0 213 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 MOCOSQ96EN8 888 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PPP1R16AQ96I34 528 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PKMYT1Q99640 499 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 LIN7BQ9HAP6 207 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SMCO4Q9NRQ5 59 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DZANK1Q9NVP4 752 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 METTL15A6NJ78 407 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ZDHHC11BP0C7U3 371 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 TEKQ02763 1124 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 TIGD3Q6B0B8 471 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 NKD1Q969G9 470 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 KIAA1143Q96AT1 154 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ATG5Q9H1Y0 275 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SP140Q13342 867 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 LASP1Q14847 261 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SLC39A4Q6P5W5 647 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 MON1AQ86VX9 555 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DNAJB3Q8WWF6 145 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 C10orf90Q96M02 699 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CIPCQ9C0C6 399 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SCAMP1O15126 338 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 KAT7O95251 611 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 IL1AP01583 271 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CBR1P16152 277 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DRD5P21918 477 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PRKXP51817 358 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 C1QTNF8P60827 252 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PTPRRQ15256 657 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 C9orf64Q5T6V5 341 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF783Q6ZMS7 281 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GPC2Q8N158 579 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 OR4K3Q96R72 315 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 FEVQ99581 238 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 TM6SF2Q9BZW4 377 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 AP1M2Q9Y6Q5 423 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CARNS1A5YM72 827 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PAN2Q504Q3 1202 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SLC30A6Q6NXT4 461 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 HASPINQ8TF76 798 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GTPBP1O00178 669 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 TNFRSF10BO14763 440 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GPR182O15218 404 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SLC34A2O95436 690 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 LALBAP00709 142 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 HRGP04196 525 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 NCBP2P52298 156 aaKnown RBP eCLIP5.83□□□□□ -1.482e-6■■■□□ 17.1
VPS13B-203ENST00000358544 UBXN11Q5T124 520 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SLC9B2Q86UD5 537 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 KIAA0319LQ8IZA0 1049 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 IQCF1Q8N6M8 205 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SCARB1Q8WTV0 552 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 LRR1Q96L50 414 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF778Q96MU6 729 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 POPDC3Q9HBV1 291 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PLIN4Q96Q06 1357 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 M0R129 80 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SDC3O75056 442 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ALPLP05186 524 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 C21orf33P30042 268 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 EPHB3P54753 998 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CXCR4P61073 352 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GALNT2Q10471 571 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CBFBQ13951 182 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms