RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.7□□□□□ -1.5
RFC1-201ENST00000349703 COL20A1Q9P218 1284 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ZNF221Q9UK13 617 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 LSM4Q9Y4Z0 139 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 M0QYV0 167 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TRIM24O15164 1050 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SNNO75324 88 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 DGAT1O75907 488 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 DNAJB5O75953 348 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 RHOCP08134 193 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SNHG28P0DPA3 235 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NR2F1P10589 423 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 EGR1P18146 543 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TPSB2P20231 275 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NDST1P52848 882 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 IL10RBQ08334 325 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 APOFQ13790 326 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TPSAB1Q15661 275 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TMEM64Q6YI46 380 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CLIP4Q8N3C7 705 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 KCTD4Q8WVF5 259 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 POP5Q969H6 163 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 FBXL8Q96CD0 374 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 Q96MT0 163 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 ZNF347Q96SE7 839 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 EBF4Q9BQW3 602 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CHID1Q9BWS9 393 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 GON7Q9BXV9 100 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 ST6GALNAC4Q9H4F1 302 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NMRAL1Q9HBL8 299 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 WWOXQ9NZC7 414 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PSME2Q9UL46 239 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 GPR52Q9Y2T5 361 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NDUFAF1Q9Y375 327 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CLCA3PQ9Y6N3 262 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 ZW10O43264 779 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PLIN3O60664 434 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SEC24AO95486 1093 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CHRM4P08173 479 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HOXB6P17509 224 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 ATF1P18846 271 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CAPGP40121 348 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 RGS19P49795 217 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CHRNB3Q05901 458 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SNTB2Q13425 540 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 RAB35Q15286 201 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 LY6KQ17RY6 165 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PTCHD3Q3KNS1 767 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 C2CD6Q53TS8 623 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 RAB41Q5JT25 222 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 DACT2Q5SW24 774 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PLEKHS1Q5SXH7 462 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 MPP7Q5T2T1 576 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HIST2H2AA3Q6FI13 130 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CORO6Q6QEF8 472 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CEACAM20Q6UY09 585 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NRARPQ7Z6K4 114 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 DDX60Q8IY21 1712 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 NKAPQ8N5F7 415 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 RFESDQ8TAC1 157 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 C16orf58Q96GQ5 468 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PPP1R2P1Q96PQ5 205 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PKP2Q99959 881 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HSD17B14Q9BPX1 270 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 APOOQ9BUR5 198 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 MMP27Q9H306 513 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SMOC2Q9H3U7 446 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NCOR1P1Q9H4R4 102 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HHATLQ9HCP6 504 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SIDT1Q9NXL6 827 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 SMPD3Q9NY59 655 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 ERGIC3Q9Y282 383 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TPRKBQ9Y3C4 175 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SPATA31A1Q5TZJ5 1347 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 BAZ2BQ9UIF8 2168 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 DHRS12A0PJE2 317 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HACD1B0YJ81 288 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 FAM86B1E9PN63 330 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 GFRA2O00451 464 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SERPINB7O75635 380 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CCNB2O95067 398 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HIST1H2AGP0C0S8 130 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 FAM86B2P0C5J1 330 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 UMPSP11172 480 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SHMT1P34896 483 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 ETV4P43268 484 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SULT1A2P50226 295 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 EPHA5P54756 1037 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 FAM189A2Q15884 450 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 ANKRD22Q5VYY1 191 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 C12orf54Q6X4T0 127 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PARS2Q7L3T8 475 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 SLCO6A1Q86UG4 719 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 HMGCLL1Q8TB92 370 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TFB1MQ8WVM0 346 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 SGCDQ92629 289 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 HIST1H2ACQ93077 130 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 LENG8Q96PV6 779 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 CRAMP1Q96RY5 1269 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms