RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PROM1O43490 865 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SLC19A2O60779 497 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 FARS2O95363 451 aaKnown RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 C1QBP02746 253 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 URODP06132 367 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ALPPL2P10696 532 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 BMP1P13497 986 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 HTR7P34969 479 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SLC19A1P41440 591 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ETV1P50549 477 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 RPS13P62277 151 aaKnown RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 MICAQ29983 383 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 TMIGD1Q6UXZ0 262 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 DLEU7Q6UYE1 221 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 RTL4Q6ZR62 310 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 COL18A1P39060 1754 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 GMDSO60547 372 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 DUSP11O75319 330 aaKnown RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SNAI1O95863 264 aaPredicted RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 STATHP02808 62 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SDHBP21912 280 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 GKP32189 559 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 FRMPD2BQ6IN97 320 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 FAM220AQ7Z4H9 259 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 FOXRED2Q8IWF2 684 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 BEND7Q8N7W2 519 aaPredicted RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 OR6K6Q8NGW6 343 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 TMEM174Q8WUU8 243 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 BOCQ9BWV1 1114 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 IFT46Q9NQC8 304 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 HEBP1Q9NRV9 189 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 NLE1Q9NVX2 485 aaPredicted RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 KLK4Q9Y5K2 254 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 C5orf51A6NDU8 294 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 M0R036 132 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 MRPS14O60783 128 aaKnown RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 CLDN11O75508 207 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 GPX5O75715 221 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SIX6O95475 246 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 MT-ND4P03905 459 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 CORO1AP31146 461 aaKnown RBP12.67□□□□□ -0.38
COL2A1-201ENST00000337299 KCNC4Q03721 635 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 FXNQ16595 210 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ODF4Q2M2E3 257 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SCGB2B2Q4G0G5 96 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 IER5LQ5T953 404 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 TMEM17Q86X19 198 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 STX12Q86Y82 276 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SYT14Q8NB59 555 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 POGLUT1Q8NBL1 392 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF680Q8NEM1 530 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ZIC5Q96T25 663 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 BTBD1Q9H0C5 482 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 MAGEH1Q9H213 219 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 SLC23A1Q9UHI7 598 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 PLEKHA6Q9Y2H5 1048 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 CACNG2Q9Y698 323 aa12.67□□□□□ -0.38
COL2A1-201ENST00000337299 NSG1P42857 185 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 RGS1Q08116 209 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 SLBPQ14493 270 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL2A1-201ENST00000337299 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 NIPSNAP1Q9BPW8 284 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 EXO5Q9H790 373 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 TRIM36Q9NQ86 728 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 ACTR10Q9NZ32 417 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 KLHL21Q9UJP4 597 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 PCDHGA6Q9Y5G7 932 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 SH3D21A4FU49 640 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 TXNL1O43396 289 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 SDC1P18827 310 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 ARFIP1P53367 373 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF91Q05481 1191 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 NXPE1Q8N323 547 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 CXCL16Q9H2A7 254 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 GKN1Q9NS71 199 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 RIIAD1A6NNX1 92 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 RPP14O95059 124 aaKnown RBP12.66□□□□□ -0.38
COL2A1-201ENST00000337299 RB1P06400 928 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF14P17017 642 aaPredicted RBP12.66□□□□□ -0.38
COL2A1-201ENST00000337299 VAMP1P23763 118 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 MTNR1AP48039 350 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 WNT4P56705 351 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 LYPLAL1Q5VWZ2 237 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 SUSD1Q6UWL2 747 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 TSPAN33Q86UF1 283 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 CHPFQ8IZ52 775 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 ADAMTS15Q8TE58 950 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 IGSF8Q969P0 613 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 BRINP2Q9C0B6 783 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF436Q9C0F3 470 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms