RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PCDHGA11Q9Y5H2 935 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PPLO60437 1756 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 SLC34A2O95436 690 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 NKX6-1P78426 367 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 PLEKHG7Q6ZR37 379 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 NAT8LQ8N9F0 302 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 CNOT9Q92600 299 aaKnown RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 NSMAFQ92636 917 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 FRZBQ92765 325 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 APOBEC3GQ9HC16 384 aaKnown RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 SDHAF3Q9NRP4 125 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 DNAJB4Q9UDY4 337 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 AGLP35573 1532 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 A8MVJ9 347 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 GKP32189 559 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 KANSL1Q7Z3B3 1105 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ZSCAN4Q8NAM6 433 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 GLIS1Q8NBF1 620 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 SULT4A1Q9BR01 284 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 BTBD1Q9H0C5 482 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PCDHGB7Q9Y5F8 929 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 DISP2A7MBM2 1401 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 E9PI62 339 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 AGXTP21549 392 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ADH6P28332 368 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PTH2RP49190 550 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 VSX2P58304 361 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 IL10RBQ08334 325 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ECH1Q13011 328 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 SGCAQ16586 387 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 THOC6Q86W42 341 aaKnown RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 SLAMF9Q96A28 289 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 MAPKAP1Q9BPZ7 522 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 FAM118AQ9NWS6 357 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 hCG_1807616A0A1W2PRN6 198 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 KCNJ11Q14654 390 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ARL5BQ96KC2 179 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 TUBA1CQ9BQE3 449 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ARHGAP9Q9BRR9 750 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 SUCNR1Q9BXA5 334 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ACSL6Q9UKU0 697 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ANKRD33BA6NCL7 494 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 SNRNP70P08621 437 aaKnown RBP7.59□□□□□ -1.19
CIITA-201ENST00000324288 BDKRB2P30411 391 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 CTBP2P56545 445 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TFB2MQ9H5Q4 396 aaKnown RBP7.59□□□□□ -1.19
CIITA-201ENST00000324288 ZBTB26Q9HCK0 441 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 GJD2Q9UKL4 321 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 PCDHGB6Q9Y5F9 930 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 SALL3Q9BXA9 1300 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 HAS3O00219 553 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 IL3P08700 152 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ATP6AP1Q15904 470 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 DECR1Q16698 335 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TMEM44Q2T9K0 475 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 KCTD20Q7Z5Y7 419 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 CTU1Q7Z7A3 348 aaKnown RBP7.59□□□□□ -1.19
CIITA-201ENST00000324288 OR2M4Q96R27 311 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 FBXL12Q9NXK8 326 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 IL20RAQ9UHF4 553 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 DERAQ9Y315 318 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 COL1A2P08123 1366 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 CAPN3P20807 821 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 PRKXP51817 358 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 SRYQ05066 204 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 C14orf80Q86SX3 495 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TMPRSS12Q86WS5 348 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 KLBQ86Z14 1044 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ZNF283Q8N7M2 679 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ABHD11Q8NFV4 315 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 OR51G2Q8NGK0 314 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 DCUN1D4Q92564 292 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 HDHD5Q9BXW7 423 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 SLC25A18Q9H1K4 315 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 POU2F3Q9UKI9 436 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ATRNL1Q5VV63 1379 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 HCRTO43612 131 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 RHBDL3P58872 404 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 GRB7Q14451 532 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 SLC36A3Q495N2 470 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ALG10BQ5I7T1 473 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 CHADLQ6NUI6 762 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 GPR83Q9NYM4 423 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 NCDNQ9UBB6 729 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 KRBA1A5PL33 1030 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 PENKP01210 267 aaPredicted RBP7.59□□□□□ -1.19
CIITA-201ENST00000324288 LIPCP11150 499 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 KCNAB2Q13303 367 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 CNIH2Q6PI25 160 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 UGT2A3Q6UWM9 527 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 PM20D2Q8IYS1 436 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 PLD6Q8N2A8 252 aaKnown RBP7.59□□□□□ -1.19
CIITA-201ENST00000324288 OR51A7Q8NH64 312 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 LHPPQ9H008 270 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TGM6O95932 706 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TNFP01375 233 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 AMY2AP04746 511 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ADH5P11766 374 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 APEHP13798 732 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms