RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 FAM171A2A8MVW0 826 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 FAM25EA8MYX2 175 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 M0QZQ0 153 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 KHDRBS3O75525 346 aaKnown RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 POP7O75817 140 aaKnown RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 PROS1P07225 676 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 BMP7P18075 431 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 KELP23276 732 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 RPL34P49207 117 aaKnown RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 CLDN2P57739 230 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 RPS25P62851 125 aaKnown RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 ZNF763Q0D2J5 394 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 MICAQ29983 383 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 TUBA3EQ6PEY2 450 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 LINGO2Q7L985 606 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 LSM14AQ8ND56 463 aaKnown RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 OR4K5Q8NGD3 323 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.64□□□□□ -0.872e-6■■■■■ 29.6
PALB2-201ENST00000261584 HOXD1Q9GZZ0 328 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 MAPRE3Q9UPY8 281 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 KCNK6Q9Y257 313 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 ZC3H12DA2A288 527 aaKnown RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 SCAMP2O15127 329 aaKnown RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 MAGEB4O15481 346 aaPredicted RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 KLHL18O94889 574 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 DHFRP00374 187 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 PAHP00439 452 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 ZNF8P17098 575 aaPredicted RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 ARHGDIBP52566 201 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 TMEM115Q12893 351 aaPredicted RBP9.64□□□□□ -0.87
PALB2-201ENST00000261584 TOR1AIP1Q5JTV8 583 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 CBLL1Q75N03 491 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 OR6K6Q8NGW6 343 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 AP3S1Q92572 193 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 RBCK1Q9BYM8 510 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 REEP4Q9H6H4 257 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 CERS4Q9HA82 394 aa9.64□□□□□ -0.87
PALB2-201ENST00000261584 NPIPA5A0A0B4J1W7 369 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 WASH3PC4AMC7 463 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 NPIPA7E9PJI5 369 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ICMTO60725 284 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 CRYZL1O95825 349 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 EPHX1P07099 455 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 NPIPA8P0DM63 369 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ACP5P13686 325 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PPIBP23284 216 aaKnown RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 NTSP30990 170 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 TIA1P31483 386 aaKnown RBP eCLIP9.63□□□□□ -0.87
PALB2-201ENST00000261584 EVI2BP34910 448 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ZNF91Q05481 1191 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PXDC1Q5TGL8 231 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PLPP4Q5VZY2 271 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PLAG1Q6DJT9 500 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 LRRC70Q7Z2Q7 622 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 RTN4RL1Q86UN2 441 aaPredicted RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 CCDC71Q8IV32 467 aaPredicted RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 USP7Q93009 1102 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PMEPA1Q969W9 287 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 DUS3LQ96G46 650 aaKnown RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 GINS4Q9BRT9 223 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 CORO2BQ9UQ03 480 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 CCDC88CQ9P219 2028 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 A0A1B0GVT2 93 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 SLC16A6O15403 523 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 CACNG3O60359 315 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 INHBBP09529 407 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 JUPP14923 745 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PCMT1P22061 227 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PTGS2P35354 604 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 TLE2Q04725 743 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 KEAP1Q14145 624 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 WDR45BQ5MNZ6 344 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 REEP3Q6NUK4 255 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ZC3H14Q6PJT7 736 aaKnown RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 C6orf120Q7Z4R8 191 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 HSD11B1LQ7Z5J1 315 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 CHPFQ8IZ52 775 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ALDH16A1Q8IZ83 802 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 KRT78Q8N1N4 520 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 TMEM145Q8NBT3 493 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 RIT1Q92963 219 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 SLC35G5Q96KT7 338 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 TEFMQ96QE5 360 aaKnown RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 CTRCQ99895 268 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 MND1Q9BWT6 205 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 RNF121Q9H920 327 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 HCN2Q9UL51 889 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 DAPL1A0PJW8 107 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 SYN3O14994 580 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PPM1DO15297 605 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 YY2O15391 372 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ERI3O43414 337 aaKnown RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 SRCP12931 536 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 NAA10P41227 235 aaPredicted RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 CLCNKAP51800 687 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 VSX2P58304 361 aaPredicted RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 ZNF385BQ569K4 471 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms