RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FAM69BQ5VUD6 431 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 PIWIL3Q7Z3Z3 882 aaKnown RBP13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 PRR18Q8N4B5 295 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 OR52E2Q8NGJ4 325 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 OSTF1Q92882 214 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 RFT1Q96AA3 541 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 PTCHD1Q96NR3 888 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 IFNA21P01568 189 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 HOXB6P17509 224 aaKnown RBP13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 POU6F2P78424 691 aaPredicted RBP13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF252P-AS1Q0IIN9 211 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 MOGQ16653 247 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF776Q68DI1 518 aaPredicted RBP13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 TMEM17Q86X19 198 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 BORCS8Q96FH0 119 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC29A3Q9BZD2 475 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 MAGED1Q9Y5V3 778 aaPredicted RBP13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 GPR32O75388 356 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 RHOP08100 348 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 DRD5P21918 477 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 SOX3P41225 446 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 BMXP51813 675 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 ARSKQ6UWY0 536 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 COMTD1Q86VU5 262 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 PEX11GQ96HA9 241 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 LHPPQ9H008 270 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 MMP28Q9H239 520 aa13.04□□□□□ -0.32
TGFBR3-201ENST00000212355 CICQ96RK0 1608 aaPredicted RBP13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 FAM227AF5H4B4 570 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 COQ9O75208 318 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 HOXC5Q00444 222 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SEC23BQ15437 767 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 CNKSR3Q6P9H4 555 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 C9orf43Q8TAL5 461 aaPredicted RBP13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 MAPK15Q8TD08 544 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 MR1Q95460 341 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SYNPO2LQ9H987 977 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 B3GALT1Q9Y5Z6 326 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 UNC119BA6NIH7 251 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 FBXO45P0C2W1 286 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 HK3P52790 923 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 NTHL1P78549 312 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 TMEM69Q5SWH9 247 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 RNF111Q6ZNA4 994 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 OR56A1Q8NGH5 318 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 CMKLR1Q99788 373 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 TMED5Q9Y3A6 229 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 LIPCP11150 499 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 CD70P32970 193 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 APOFQ13790 326 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 PLBD1Q6P4A8 553 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 OR4K14Q8NGD5 310 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 OR4K13Q8NH42 304 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 TSGA13Q96PP4 275 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 PRTFDC1Q9NRG1 225 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 KCNE1P15382 129 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC6A6P31641 620 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 CLCA4Q14CN2 919 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 LPAL2Q16609 132 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 CHST14Q8NCH0 376 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 LRR1Q96L50 414 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 GPR174Q9BXC1 333 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 MGAT4CQ9UBM8 478 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 EEF1E1-BLOC1S5C9J1V9 151 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 KLF11O14901 512 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 FLRT2O43155 660 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SEC14L5O43304 696 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 FMO6PO60774 539 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SRPRAP08240 638 aaKnown RBP13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 DOC2AQ14183 400 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 C6orf141Q5SZD1 244 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SHQ1Q6PI26 577 aaKnown RBP13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC15A4Q8N697 577 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 WFIKKN2Q8TEU8 576 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 IRF7Q92985 503 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 TPSD1Q9BZJ3 242 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 ARMC1Q9NVT9 282 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 PADI2Q9Y2J8 665 aa13.03□□□□□ -0.32
TGFBR3-201ENST00000212355 HTR3EA5X5Y0 456 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 CAPN14A8MX76 684 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 LDOC1O95751 146 aaPredicted RBP13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 PYCR1P32322 319 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 DNAJB13P59910 316 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.02□□□□□ -0.325e-11■■■■■ 42.7
TGFBR3-201ENST00000212355 ZNF551Q7Z340 670 aaPredicted RBP13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 DCUN1D3Q8IWE4 304 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC7A5P1Q8MH63 180 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 OR5D16Q8NGK9 328 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF514Q96K75 400 aaPredicted RBP13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 FUNDC2Q9BWH2 189 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 PRELID1Q9Y255 219 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 CSTAP01040 98 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 GALTP07902 379 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms