RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Oosp1Q925U0 202 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ints11Q9CWS4 600 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ndufs4Q9CXZ1 175 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Insm2Q9JMC2 493 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Jag2Q9QYE5 1247 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Aqp5Q9WTY4 265 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Fkbp9Q9Z247 570 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 4930595M18RikA2RRY9 829 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Slc27a6E9Q9W4 619 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 ClockO08785 855 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 GcatO88986 416 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Wipf3P0C7L0 485 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Msr1P30204 458 aaKnown RBP21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 GlaP51569 419 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Fbxo40P62932 710 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Kcna7Q17ST2 489 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Tex52Q3TTI8 308 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cachd1Q6PDJ1 1288 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Megf11Q80T91 1091 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Fignl1Q8BPY9 683 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ddx52Q8K301 598 aaKnown RBP21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Colec12Q8K4Q8 742 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Vmn1r198Q8R263 300 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Vmn1r234Q8R298 329 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Asb17Q8VHP9 295 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Klhdc8aQ91XA8 350 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Asb9Q91ZT8 290 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Chchd3Q9CRB9 227 aaKnown RBP21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ca5bQ9QZA0 317 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cib1Q9Z0F4 191 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 1700028J19RikA0A0U1RP08 172 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Klhl3E0CZ16 587 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Gm20878L7N244 103 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ppt2O35448 302 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Rem1O35929 297 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Foxq1O70220 400 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cd93O89103 644 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Klk1b9P15949 261 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ptpn2Q06180 406 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 C2cd4cC2CD4Q5HZI2 419 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Zfp78Q5U406 512 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Gpr39Q5U431 456 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr12Q60894 333 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 RimklaQ6PFX8 380 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Pik3cbQ8BTI9 1064 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 E330021D16RikQ8BW45 371 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Sidt2Q8CIF6 832 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Nckap1lQ8K1X4 1134 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Slc15a4Q91W98 574 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Pcdhb20Q91XZ9 799 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Chil4Q91Z98 402 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Msh4Q99MT2 958 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 4933421I07RikQ9D420 214 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr705Q9EPF7 316 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Dnaja2Q9QYJ0 412 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Psma4Q9R1P0 261 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Itgb6Q9Z0T9 787 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Uba2Q9Z1F9 638 aa21.48■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cfap77A0A087WRI3 283 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Tmem74bA2AU34 232 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Gm6619F6URP1 175 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Sap18O55128 153 aaKnown RBP21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 MbP04247 154 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Fth1P09528 182 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 CapzbP47757 277 aaKnown RBP21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 AhcyP50247 432 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 AcadvlP50544 656 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Lrpap1P55302 360 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 AdmP97297 184 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Slc30a3P97441 388 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Apoa1Q00623 264 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Slc37a3Q3TIT8 494 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Lsg1Q3UM18 644 aaKnown RBP21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Usp22Q5DU02 525 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 CishQ62225 257 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Gpalpp1Q69ZC8 346 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 D11Wsu47eQ6PIX9 558 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cyp2r1Q6VVW9 501 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr1134Q7TR43 312 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Banf2Q8BVR0 90 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Rgs8Q8BXT1 180 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Tmem252Q8C353 183 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Rab36Q8CAM5 267 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Erich5Q8K0S2 362 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 ManbaQ8K2I4 879 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Crtc3Q91X84 619 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Hspa14Q99M31 509 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Mrps18bQ99N84 254 aa21.47■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Vmn2r125D3Z3M1 369 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Vmn2r18E9Q280 788 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 EmdO08579 259 aaKnown RBP21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Pld3O35405 488 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Npc1O35604 1277 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Tssk2O54863 358 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 BrafP28028 804 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 NfycP70353 335 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Casp3P70677 277 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 SirpaP97797 513 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 AcadsQ07417 412 aaKnown RBP21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Kcnk6Q3TBV4 313 aa21.46■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms