Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Gm25239-201ENSMUST00000174915 86 ntBASIC35.87■■■■□ 3.33
CishQ62225 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CishQ62225 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CishQ62225 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CishQ62225 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CishQ62225 Gm15042-201ENSMUST00000120212 883 ntBASIC31.66■■■□□ 2.66
CishQ62225 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
CishQ62225 Gm15045-201ENSMUST00000117359 883 ntBASIC30.99■■■□□ 2.55
CishQ62225 Gm24109-201ENSMUST00000175489 103 ntBASIC30.92■■■□□ 2.54
CishQ62225 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CishQ62225 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CishQ62225 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CishQ62225 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CishQ62225 Gm23366-201ENSMUST00000175022 89 ntBASIC30.02■■■□□ 2.4
CishQ62225 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.96■■■□□ 2.39
CishQ62225 Psd-208ENSMUST00000224556 2034 ntBASIC29.95■■■□□ 2.39
CishQ62225 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CishQ62225 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CishQ62225 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CishQ62225 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
CishQ62225 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CishQ62225 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CishQ62225 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CishQ62225 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
CishQ62225 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
CishQ62225 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CishQ62225 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.24■■■□□ 2.27
CishQ62225 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
CishQ62225 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CishQ62225 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.06■■■□□ 2.24
CishQ62225 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CishQ62225 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.84■■■□□ 2.21
CishQ62225 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CishQ62225 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CishQ62225 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.6■■■□□ 2.17
CishQ62225 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.38■■■□□ 2.13
CishQ62225 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CishQ62225 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.33■■■□□ 2.13
CishQ62225 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CishQ62225 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CishQ62225 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CishQ62225 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CishQ62225 Gm25238-201ENSMUST00000174914 89 ntBASIC28.2■■■□□ 2.1
CishQ62225 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CishQ62225 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.19■■■□□ 2.1
CishQ62225 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CishQ62225 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CishQ62225 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.03■■■□□ 2.08
CishQ62225 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CishQ62225 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CishQ62225 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CishQ62225 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CishQ62225 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CishQ62225 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CishQ62225 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.81■■■□□ 2.04
CishQ62225 Gm27325-201ENSMUST00000175467 74 ntBASIC27.8■■■□□ 2.04
CishQ62225 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CishQ62225 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.75■■■□□ 2.03
CishQ62225 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.7■■■□□ 2.02
CishQ62225 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CishQ62225 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.63■■■□□ 2.01
CishQ62225 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CishQ62225 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CishQ62225 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
CishQ62225 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CishQ62225 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
CishQ62225 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.43■■□□□ 1.98
CishQ62225 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CishQ62225 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CishQ62225 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CishQ62225 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CishQ62225 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CishQ62225 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.38■■□□□ 1.97
CishQ62225 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.38■■□□□ 1.97
CishQ62225 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CishQ62225 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.27■■□□□ 1.96
CishQ62225 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CishQ62225 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CishQ62225 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CishQ62225 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.12■■□□□ 1.93
CishQ62225 Rab21-202ENSMUST00000218831 843 ntBASIC27.11■■□□□ 1.93
CishQ62225 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CishQ62225 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
CishQ62225 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CishQ62225 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.99■■□□□ 1.91
CishQ62225 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CishQ62225 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CishQ62225 Gm25262-201ENSMUST00000174934 133 ntBASIC26.89■■□□□ 1.9
CishQ62225 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CishQ62225 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CishQ62225 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.79■■□□□ 1.88
CishQ62225 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
CishQ62225 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CishQ62225 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CishQ62225 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CishQ62225 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CishQ62225 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.68■■□□□ 1.86
CishQ62225 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CishQ62225 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CishQ62225 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms