RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm853Q3UNZ2 425 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr1322Q7TQW3 310 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Crb2Q80YA8 1282 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Bbs4Q8C1Z7 520 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Lancl3Q8CD19 420 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Kctd2Q8CEZ0 266 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Slc22a22Q8R0S9 554 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tex46Q9CPU3 165 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pfdn1Q9CWM4 122 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 9230112D13RikQ9D260 137 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Sp2Q9D2H6 612 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Cldn34b2Q9D9N2 209 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Socs6Q9JLY0 533 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Orc6Q9WUJ8 262 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Scgb2b17S4R2V3 82 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 DmdP11531 3678 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Cd300ld4A2A7W1 245 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Socs5O54928 536 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 JtbO88824 146 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gas2P11862 314 aaKnown RBP11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Adrb1P34971 466 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Atp6v1e1P50518 226 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Polr1cP52432 346 aaKnown RBP11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Lrpap1P55302 360 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Serpina7P61939 418 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Fbxo40P62932 710 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Kbtbd8Q3UQV5 599 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ppp3r2Q63811 179 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 PtprcapQ64697 197 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 WdcpQ6NV72 663 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gramd2bQ6PEM6 445 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Cd300ld3Q6SJQ5 245 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Znf750Q8BH05 703 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Lcmt2Q8BYR1 686 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 MmaaQ8C7H1 415 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tbc1d14Q8CGA2 694 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ccdc58Q8R3Q6 144 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Oard1Q8R5F3 152 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr315Q8VFG7 309 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Snx11Q91WL6 271 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 CrebzfQ91ZR3 358 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Slc22a17Q9D9E0 401 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Xrn2Q9DBR1 951 aaKnown RBP11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Bloc1s6Q9R0C0 172 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ralgps1A2AR50 585 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 AU018091E9PWS4 684 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Rhox13F6YCR7 232 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ccl26F8VQM2 93 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Slc6a2O55192 617 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Mpzl2O70255 215 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tk1P04184 233 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Hoxb9P20615 250 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tia1P52912 386 aaKnown RBP11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 C1orf109Q499E6 217 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Elavl4Q61701 385 aaKnown RBP11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Enkd1Q7TSV9 346 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Vangl1Q80Z96 526 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Dtd2Q8BHA3 168 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 CtsoQ8BM88 312 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Lrrtm3Q8BZ81 582 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 SdslQ8R238 329 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 McatQ8R3F5 381 aaKnown RBP11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Hhipl2Q9D2G9 717 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Dll4Q9JI71 686 aa11.05□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Irs2P81122 1321 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Nt5c1aA3KFX0 365 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Fam46aD3Z5S8 447 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Mapk12O08911 367 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 TertO70372 1122 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ctla2bP12400 113 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 AcrP23578 436 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Hsd3b1P24815 373 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 DcnP28654 354 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 VaspP70460 375 aaKnown RBP11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pde12Q3TIU4 608 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Sez6l2Q4V9Z5 910 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Taar8aQ5QD07 344 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Galnt7Q80VA0 657 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Q80Y39 304 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ankrd9Q8BH83 326 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Mapre2Q8R001 326 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Wdr74Q8VCG3 384 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr308Q8VFP2 308 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr45Q8VGM1 311 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr666Q8VH00 318 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Grip1Q925T6 1127 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gimap3Q99MI6 301 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ankrd7Q9D504 279 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 LhppQ9D7I5 270 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 NaaaQ9D7V9 362 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Atp5oQ9DB20 213 aaKnown RBP11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Plag1Q9QYE0 499 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Itgb6Q9Z0T9 787 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Frem3Q5H8B9 2123 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Malrd1A2AJX4 2123 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Prr36E9PV26 1098 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr891E9Q843 316 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Slc7a2P18581 657 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Nsg2P47759 171 aa11.04□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Nat3P50296 290 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms