RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PDZD2O15018 2839 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 DNAJC13O75165 2243 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 CACNA1CQ13936 2221 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 APCP25054 2843 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 A0A1B0GTL3 188 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 DYTNA2CJ06 578 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 PINLYPA6NC86 204 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 UBXN8O00124 270 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ADAM10O14672 748 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 PRMT3O60678 531 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 CCDC22O60826 627 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 CLEC3AO75596 197 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 UNC5CO95185 931 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 RASAL1O95294 804 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ETHE1O95571 254 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 RBP1P09455 135 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 LTA4HP09960 611 aaKnown RBP7.31□□□□□ -1.24
PNKP-229ENST00000637897 GNAZP19086 355 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 GRK3P35626 688 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 SERPINB5P36952 375 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 CASP2P42575 452 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 HNMTP50135 292 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 LIM2P55344 173 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 NCALDP61601 193 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 HSF1Q00613 529 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 RGS1Q08116 209 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 OR1C1Q15619 314 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 TBCCQ15814 346 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 INAQ16352 499 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 EXT1Q16394 746 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 C3AR1Q16581 482 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 MEP1AQ16819 746 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ABHD17BQ5VST6 288 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 IRAK1BP1Q5VVH5 260 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 LIPMQ5VYY2 423 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 CES4AQ5XG92 561 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 FAM91A1Q658Y4 838 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 FAM180AQ6UWF9 173 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 TMIGD1Q6UXZ0 262 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ZCCHC23Q6ZST2 131 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 GALNTL5Q7Z4T8 443 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 MDGA2Q7Z553 956 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 CLNKQ7Z7G1 428 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ADGRG4Q8IZF6 3080 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 KIRREL3Q8IZU9 778 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 TRPV3Q8NET8 790 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 KCTD4Q8WVF5 259 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 GAL3ST3Q96A11 431 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ANKRD9Q96BM1 317 aaPredicted RBP7.31□□□□□ -1.24
PNKP-229ENST00000637897 CCDC120Q96HB5 630 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 VPS50Q96JG6 964 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ZNF354BQ96LW1 612 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 MAGEB10Q96LZ2 347 aaPredicted RBP7.31□□□□□ -1.24
PNKP-229ENST00000637897 F2RL3Q96RI0 385 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 LPAR4Q99677 370 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 EGFL8Q99944 293 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 MS4A8Q9BY19 250 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 TRIM54Q9BYV2 358 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.31□□□□□ -1.24
PNKP-229ENST00000637897 MRPL46Q9H2W6 279 aaKnown RBP7.31□□□□□ -1.24
PNKP-229ENST00000637897 ALG9Q9H6U8 611 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 PRDM9Q9NQV7 894 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 KLHL1Q9NR64 748 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 DEPPQ9NTK1 212 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 DNAJC11Q9NVH1 559 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 ZNF358Q9NW07 568 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 OXSMQ9NWU1 459 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 GPRC5BQ9NZH0 403 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 HEY2Q9UBP5 337 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 C19orf25Q9UFG5 118 aaPredicted RBP7.31□□□□□ -1.24
PNKP-229ENST00000637897 DAPP1Q9UN19 280 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 DYRK1BQ9Y463 629 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 PCDHGB6Q9Y5F9 930 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 AKAP9Q99996 3911 aa7.31□□□□□ -1.24
PNKP-229ENST00000637897 A0A0G2JMM0 328 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 A0A1W2PPB8 328 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 A0A1W2PRS3 328 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 A0A1W2PS29 197 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 CCDC189A1A4V9 331 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 KIR3DP1A8MWS1 328 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SLCO1B7G3V0H7 640 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 C19orf84I3L1E1 186 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 HRKO00198 91 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 ERI3O43414 337 aaKnown RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 ITM2AO43736 263 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 KLK8O60259 260 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SH3BGRLO75368 114 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 PRKRAO75569 313 aaKnown RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 STK16O75716 305 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SCELO95171 688 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 HSPA4LO95757 839 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SP1P08047 785 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SBK3P0C264 359 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 RNH1P13489 461 aaKnown RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 ALOX15P16050 662 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 TFEBP19484 476 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 ATP5F1P24539 256 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 TRHRP34981 398 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 CA7P43166 264 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 PLA2G16P53816 162 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms