RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZNF100Q8IYN0 542 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SMYD1Q8NB12 490 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 RADILQ96JH8 1075 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 CEP19Q96LK0 163 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 C7orf26Q96N11 449 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TEX101Q9BY14 249 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 MYLK2Q9H1R3 596 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 ELL3Q9HB65 397 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 UPB1Q9UBR1 384 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TCF20Q9UGU0 1960 aaKnown RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 HAT1O14929 419 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SMNDC1O75940 238 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 IGHA2P01877 340 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 DRD2P14416 443 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SPINK2P20155 84 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 CCNOP22674 350 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 CBLP22681 906 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 FOXK1P85037 733 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 C5orf22Q49AR2 442 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 GLYATQ6IB77 296 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 IKBIPQ70UQ0 350 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 JAZF1Q86VZ6 243 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 ULK2Q8IYT8 1036 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 C8orf44Q96CB5 159 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 G6PC3Q9BUM1 346 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SPRTNQ9H040 489 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SEC61A2Q9H9S3 476 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SLC35C2Q9NQQ7 365 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 KLHL42Q9P2K6 505 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 ENOPH1Q9UHY7 261 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 GDF9O60383 454 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SNX3O60493 162 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SHOX2O60902 331 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 RFPL1O75677 317 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 MMP2P08253 660 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 HIST1H1TP22492 207 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 PTPN4P29074 926 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 HTR6P50406 440 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 DIO3P55073 304 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 MERTKQ12866 999 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TERF2Q15554 542 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 UNC50Q53HI1 259 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 VWA2Q5GFL6 755 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 C6orf136Q5SQH8 315 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 OR5M10Q6IEU7 315 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 GRHL2Q6ISB3 625 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 CNEP1R1Q8N9A8 125 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TP53I13Q8NBR0 393 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TEX47Q8TBZ9 253 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 ADOQ96SZ5 270 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 S100A13Q99584 98 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 CCDC134Q9H6E4 229 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TPT1P8Q9HAU6 139 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 VDAC3Q9Y277 283 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SLC17A4Q9Y2C5 497 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TRABD2BA6NFA1 517 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 IDSB3KWA1 339 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 H7C0S8 307 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 PRAMEF2O60811 474 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SFTPDP35247 375 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 CLDN6P56747 220 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 UFM1P61960 85 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TYSND1Q2T9J0 566 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 KCTD11Q693B1 232 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 DPY19L2P1Q6NXN4 242 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 TMEM178AQ8NBL3 297 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 OR9I1Q8NGQ6 314 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 STT3BQ8TCJ2 826 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SAMD4AQ9UPU9 718 aaKnown RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 BBIP1A8MTZ0 92 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 EMC8O43402 210 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 IVDP26440 423 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 RPS26P62854 115 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SCARB2Q14108 478 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SYT16Q17RD7 645 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 FAM199XQ6PEV8 388 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 RPS19BP1Q86WX3 136 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 RNF130Q86XS8 419 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ECHDC3Q96DC8 303 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 TMEM109Q9BVC6 243 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SPATA9Q9BWV2 254 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 LIN28AQ9H9Z2 209 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF160Q9HCG1 818 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SLC40A1Q9NP59 571 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 COQ3Q9NZJ6 369 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 WDR37Q9Y2I8 494 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 LNP1A1A4G5 178 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 PPM1DO15297 605 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 HCN1O60741 890 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 IFNGP01579 166 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 MT-ND1P03886 318 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 BCKDHAP12694 445 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 LIPEQ05469 1076 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SLC9B1Q4ZJI4 515 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 METTL21CQ5VZV1 264 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SMARCD3Q6STE5 483 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 TIFABQ6ZNK6 161 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 BHLHE22Q8NFJ8 381 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 OR7A2PQ8NGA2 310 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 TANKQ92844 425 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms