RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 GIMAP2Q9UG22 337 aa29.78■■■□□ 2.36
FMR1-216ENST00000616614 EPB41L3Q9Y2J2 1087 aaPredicted RBP29.78■■■□□ 2.36
FMR1-216ENST00000616614 POLR3HQ9Y535 204 aaPredicted RBP29.78■■■□□ 2.36
FMR1-216ENST00000616614 PCDHA9Q9Y5H5 950 aa29.78■■■□□ 2.36
FMR1-216ENST00000616614 BSNQ9UPA5 3926 aa29.78■■■□□ 2.36
FMR1-216ENST00000616614 SMG1Q96Q15 3661 aaKnown RBP29.78■■■□□ 2.36
FMR1-216ENST00000616614 SAGE2PA6NJ88 616 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 LSM1O15116 133 aaKnown RBP29.77■■■□□ 2.36
FMR1-216ENST00000616614 SKAP2O75563 359 aaPredicted RBP29.77■■■□□ 2.36
FMR1-216ENST00000616614 TAS2R50P59544 299 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 TRA2BP62995 288 aaKnown RBP29.77■■■□□ 2.36
FMR1-216ENST00000616614 TCTN3Q6NUS6 607 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 C16orf78Q8WTQ4 265 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 MANSC1Q9H8J5 431 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 LRTM1Q9HBL6 345 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 ZBTB20Q9HC78 741 aaPredicted RBP29.77■■■□□ 2.36
FMR1-216ENST00000616614 PNPOQ9NVS9 261 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 C1orf109Q9NX04 203 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 C5AR2Q9P296 337 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 HEY2Q9UBP5 337 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 CES1P1Q9UKY3 287 aa29.77■■■□□ 2.36
FMR1-216ENST00000616614 GNG14A0A1W2PPG7 69 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 SEC22BO75396 215 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 MYO1DO94832 1006 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 GPR75O95800 540 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 ANXA4P09525 319 aaPredicted RBP29.76■■■□□ 2.35
FMR1-216ENST00000616614 NR6A1Q15406 480 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 RFTN2Q52LD8 501 aaPredicted RBP29.76■■■□□ 2.35
FMR1-216ENST00000616614 DGAT2L6Q6ZPD8 337 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 BRIX1Q8TDN6 353 aaKnown RBP29.76■■■□□ 2.35
FMR1-216ENST00000616614 PTPMT1Q8WUK0 201 aaPredicted RBP29.76■■■□□ 2.35
FMR1-216ENST00000616614 SMAD5Q99717 465 aaKnown RBP29.76■■■□□ 2.35
FMR1-216ENST00000616614 SLC25A18Q9H1K4 315 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 WDR41Q9HAD4 459 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 DLGAP4Q9Y2H0 992 aa29.76■■■□□ 2.35
FMR1-216ENST00000616614 IFNA16P05015 189 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 IL3P08700 152 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 ICAM2P13598 275 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 RPL14P50914 215 aaKnown RBP29.75■■■□□ 2.35
FMR1-216ENST00000616614 PPP2R2AP63151 447 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 SERTAD2Q14140 314 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 OR52E8Q6IFG1 317 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 NOXRED1Q6NXP6 359 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 M1APQ8TC57 530 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 PPWD1Q96BP3 646 aaKnown RBP29.75■■■□□ 2.35
FMR1-216ENST00000616614 MMP25Q9NPA2 562 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 ADAP2Q9NPF8 381 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 ATRXP46100 2492 aa29.75■■■□□ 2.35
FMR1-216ENST00000616614 ATP6AP2A0A1C7CYW4 349 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 GUCY1B2O75343 617 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 ATP6AP2O75787 350 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 EXT1Q16394 746 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 KIF2BQ8N4N8 673 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 PUM2Q8TB72 1066 aaKnown RBP eCLIP29.74■■■□□ 2.35
FMR1-216ENST00000616614 RAB3IL1Q8TBN0 382 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 FCRL1Q96LA6 429 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 THAP1Q9NVV9 213 aa29.74■■■□□ 2.35
FMR1-216ENST00000616614 C1orf226A1L170 272 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 SNUPNO95149 360 aaKnown RBP29.73■■■□□ 2.35
FMR1-216ENST00000616614 PRB1P04280 392 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 SFTPCP11686 197 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 TACR1P25103 407 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 STT3AP46977 705 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 GPR143P51810 404 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 PGDP52209 483 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 ELAVL1Q15717 326 aaKnown RBP29.73■■■□□ 2.35
FMR1-216ENST00000616614 ZNF750Q32MQ0 723 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 LACTB2Q53H82 288 aaPredicted RBP29.73■■■□□ 2.35
FMR1-216ENST00000616614 SLC48A1Q6P1K1 146 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 HOMEZQ8IX15 550 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 SIRT6Q8N6T7 355 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 FAM76AQ8TAV0 307 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 ZNF75CPQ92670 426 aaPredicted RBP29.73■■■□□ 2.35
FMR1-216ENST00000616614 METTL2AQ96IZ6 378 aaKnown RBP29.73■■■□□ 2.35
FMR1-216ENST00000616614 ACBD3Q9H3P7 528 aa29.73■■■□□ 2.35
FMR1-216ENST00000616614 OCRLQ01968 901 aa29.72■■■□□ 2.35
FMR1-216ENST00000616614 TERF2Q15554 542 aa29.72■■■□□ 2.35
FMR1-216ENST00000616614 PDCD2Q16342 344 aaPredicted RBP29.72■■■□□ 2.35
FMR1-216ENST00000616614 GALNTL6Q49A17 601 aa29.72■■■□□ 2.35
FMR1-216ENST00000616614 VWA5B1Q5TIE3 1220 aa29.72■■■□□ 2.35
FMR1-216ENST00000616614 B3GNTL1Q67FW5 361 aaPredicted RBP29.72■■■□□ 2.35
FMR1-216ENST00000616614 APCDD1LQ8NCL9 501 aa29.72■■■□□ 2.35
FMR1-216ENST00000616614 ELP5Q8TE02 316 aa29.72■■■□□ 2.35
FMR1-216ENST00000616614 DOK4Q8TEW6 326 aa29.72■■■□□ 2.35
FMR1-216ENST00000616614 PPIEQ9UNP9 301 aaKnown RBP29.72■■■□□ 2.35
FMR1-216ENST00000616614 EXO1Q9UQ84 846 aaKnown RBP29.72■■■□□ 2.35
FMR1-216ENST00000616614 PEX11AO75192 247 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 ALDH9A1P49189 494 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 RPL38P63173 70 aaKnown RBP29.71■■■□□ 2.35
FMR1-216ENST00000616614 ZNF763Q0D2J5 394 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 ATG16L1Q676U5 607 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 FAM180BQ6P0A1 224 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 ASB18Q6ZVZ8 466 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 TRIM42Q8IWZ5 723 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 C19orf60Q96EN9 201 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 EGLN2Q96KS0 407 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 PPP1R36Q96LQ0 422 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 PTGFRNQ9P2B2 879 aa29.71■■■□□ 2.35
FMR1-216ENST00000616614 ZNF223Q9UK11 482 aaPredicted RBP29.71■■■□□ 2.35
FMR1-216ENST00000616614 KLF11O14901 512 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms