RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ARNT2Q9HBZ2 717 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MYO7AQ13402 2215 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 C13orf42A0A1B0GVH6 325 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 A0A1W2PPQ1 181 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 LOC390937A0A1W2PQ73 354 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CLIC1O00299 241 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ATXN8OSP0DMR3 200 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 C5AR1P21730 350 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CPT1AP50416 773 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 RPL23AP62750 156 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 LIX1LQ8IVB5 337 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 HORMAD2Q8N7B1 307 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM68Q96MH6 324 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SEMA4BQ9NPR2 832 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 GYG1P46976 350 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CDH12P55289 794 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SNRPEP62304 92 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CBWD6Q4V339 395 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DALRD3Q5D0E6 543 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 EFCAB12Q6NXP0 572 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FAM185AQ8N0U4 392 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 GTPBP3Q969Y2 492 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DNAJC19Q96DA6 116 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 NXF2Q9GZY0 626 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 GREM2Q9H772 168 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 BEX1Q9HBH7 125 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FAM212BQ9NTI7 297 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 C17orf113A0A1B0GUU1 675 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ARL5CA6NH57 179 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 METTL15A6NJ78 407 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF33AQ06730 810 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MADCAM1Q13477 382 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TANGO2Q6ICL3 276 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TRAPPC5Q8IUR0 188 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF384Q8TF68 577 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TECTBQ96PL2 329 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 NAA50Q9GZZ1 169 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SYT4Q9H2B2 425 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SCML1Q9UN30 329 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM82A0PJX8 343 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ATG13O75143 517 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SNRNP70P08621 437 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 PHKG2P15735 406 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TUBG1P23258 451 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SNCAP37840 140 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ASPAP45381 313 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 GOLGA7BQ2TAP0 167 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MYLIPQ8WY64 445 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CCM2Q9BSQ5 444 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MAP10Q9P2G4 905 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 NRXN3Q9Y4C0 1643 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 C4AP0C0L4 1744 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 C4BP0C0L5 1744 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 OR2C1O95371 312 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 RAB36O95755 333 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 QDPRP09417 244 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ARHGEF7Q14155 803 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TOMM34Q15785 309 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MICAQ29983 383 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 KIAA1324Q6UXG2 1013 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TAC4Q86UU9 113 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SLC30A7Q8NEW0 376 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TRIB2Q92519 343 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 BPIFA2Q96DR5 249 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CCDC74BQ96LY2 380 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TINAGL1Q9GZM7 467 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 NOP16Q9Y3C1 178 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 POM121BA6NF01 834 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 RNF13O43567 381 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 POMCP01189 267 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 GCP02774 474 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF8P17098 575 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FCGRTP55899 365 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 PRKCZQ05513 592 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF273Q14593 569 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 C22orf42Q6IC83 251 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 RHBDF2Q6PJF5 856 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FAM83HQ6ZRV2 1179 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TRAM1L1Q8N609 369 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FAM216AQ8WUB2 273 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 IL4I1Q96RQ9 567 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 NPAS1Q99742 590 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SDCBP2Q9H190 292 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 LATS1O95835 1130 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 GPR15P49685 360 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 PPT1P50897 306 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF280AP59817 542 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF691Q5VV52 312 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 HSD17B13Q7Z5P4 300 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 B3GNT8Q7Z7M8 397 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 VRK3Q8IV63 474 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MFSD4AQ8N468 514 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 NAT16Q8N8M0 369 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SPPL2BQ8TCT7 592 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 KREMEN1Q96MU8 473 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CISHQ9NSE2 258 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CORINQ9Y5Q5 1042 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms