RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 E2F2Q14209 437 aa15.08■□□□□ 0
LIG1-205ENST00000593425 TBCCQ15814 346 aa15.08■□□□□ 0
LIG1-205ENST00000593425 ZNF791Q3KP31 576 aaPredicted RBP15.08■□□□□ 0
LIG1-205ENST00000593425 KRTAP21-3Q3LHN1 58 aa15.08■□□□□ 0
LIG1-205ENST00000593425 PAGE2BQ5JRK9 111 aa15.08■□□□□ 0
LIG1-205ENST00000593425 CDKL4Q5MAI5 379 aa15.08■□□□□ 0
LIG1-205ENST00000593425 WLSQ5T9L3 541 aa15.08■□□□□ 0
LIG1-205ENST00000593425 PRAMEF20Q5VT98 475 aa15.08■□□□□ 0
LIG1-205ENST00000593425 CREG2Q8IUH2 290 aa15.08■□□□□ 0
LIG1-205ENST00000593425 RNF175Q8N4F7 328 aa15.08■□□□□ 0
LIG1-205ENST00000593425 SRFBP1Q8NEF9 429 aaKnown RBP15.08■□□□□ 0
LIG1-205ENST00000593425 NUBPLQ8TB37 319 aa15.08■□□□□ 0
LIG1-205ENST00000593425 DOK4Q8TEW6 326 aa15.08■□□□□ 0
LIG1-205ENST00000593425 PPWD1Q96BP3 646 aaKnown RBP15.08■□□□□ 0
LIG1-205ENST00000593425 POM121Q96HA1 1249 aa15.08■□□□□ 0
LIG1-205ENST00000593425 SENP5Q96HI0 755 aaPredicted RBP15.08■□□□□ 0
LIG1-205ENST00000593425 LIME1Q9H400 295 aa15.08■□□□□ 0
LIG1-205ENST00000593425 EXO5Q9H790 373 aa15.08■□□□□ 0
LIG1-205ENST00000593425 PROK2Q9HC23 129 aa15.08■□□□□ 0
LIG1-205ENST00000593425 SLC24A3Q9HC58 644 aa15.08■□□□□ 0
LIG1-205ENST00000593425 TRMT1Q9NXH9 659 aaKnown RBP15.08■□□□□ 0
LIG1-205ENST00000593425 DNAJB12Q9NXW2 375 aaKnown RBP15.08■□□□□ 0
LIG1-205ENST00000593425 ALKBH4Q9NXW9 302 aa15.08■□□□□ 0
LIG1-205ENST00000593425 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.08■□□□□ 0
LIG1-205ENST00000593425 SPACA6W5XKT8 324 aa15.08■□□□□ 0
LIG1-205ENST00000593425 LRRC3CA6NJW4 275 aa15.07■□□□□ 0
LIG1-205ENST00000593425 EFCAB8A8MWE9 144 aa15.07■□□□□ 0
LIG1-205ENST00000593425 HCN1O60741 890 aa15.07■□□□□ 0
LIG1-205ENST00000593425 PRKRAO75569 313 aaKnown RBP15.07■□□□□ 0
LIG1-205ENST00000593425 CTAG2O75638 210 aa15.07■□□□□ 0
LIG1-205ENST00000593425 PCNAP12004 261 aa15.07■□□□□ 0
LIG1-205ENST00000593425 SSR2P43308 183 aa15.07■□□□□ 0
LIG1-205ENST00000593425 ATP6V0D1P61421 351 aa15.07■□□□□ 0
LIG1-205ENST00000593425 HIST2H2ACQ16777 129 aaPredicted RBP15.07■□□□□ 0
LIG1-205ENST00000593425 AP5B1Q2VPB7 878 aa15.07■□□□□ 0
LIG1-205ENST00000593425 SLC25A35Q3KQZ1 300 aa15.07■□□□□ 0
LIG1-205ENST00000593425 HIST2H2AA3Q6FI13 130 aa15.07■□□□□ 0
LIG1-205ENST00000593425 ARSKQ6UWY0 536 aa15.07■□□□□ 0
LIG1-205ENST00000593425 LRRC70Q7Z2Q7 622 aa15.07■□□□□ 0
LIG1-205ENST00000593425 WDR53Q7Z5U6 358 aaPredicted RBP15.07■□□□□ 0
LIG1-205ENST00000593425 LAS2Q8IYD9 372 aa15.07■□□□□ 0
LIG1-205ENST00000593425 ZZZ3Q8IYH5 903 aa15.07■□□□□ 0
LIG1-205ENST00000593425 BBOF1Q8ND07 529 aa15.07■□□□□ 0
LIG1-205ENST00000593425 SLC22A8Q8TCC7 542 aa15.07■□□□□ 0
LIG1-205ENST00000593425 PAQR8Q8TEZ7 354 aa15.07■□□□□ 0
LIG1-205ENST00000593425 SPACA9Q96E40 222 aaPredicted RBP15.07■□□□□ 0
LIG1-205ENST00000593425 TSPAN17Q96FV3 270 aa15.07■□□□□ 0
LIG1-205ENST00000593425 DGAT2Q96PD7 388 aa15.07■□□□□ 0
LIG1-205ENST00000593425 GPR22Q99680 433 aa15.07■□□□□ 0
LIG1-205ENST00000593425 RBBP8Q99708 897 aa15.07■□□□□ 0
LIG1-205ENST00000593425 TMUB1Q9BVT8 246 aa15.07■□□□□ 0
LIG1-205ENST00000593425 CD244Q9BZW8 370 aa15.07■□□□□ 0
LIG1-205ENST00000593425 PHACTR1Q9C0D0 580 aa15.07■□□□□ 0
LIG1-205ENST00000593425 CXXC4Q9H2H0 198 aa15.07■□□□□ 0
LIG1-205ENST00000593425 SLC6A15Q9H2J7 730 aa15.07■□□□□ 0
LIG1-205ENST00000593425 CCM2LQ9NUG4 571 aaPredicted RBP15.07■□□□□ 0
LIG1-205ENST00000593425 ZNF358Q9NW07 568 aa15.07■□□□□ 0
LIG1-205ENST00000593425 SNX24Q9Y343 169 aa15.07■□□□□ 0
LIG1-205ENST00000593425 ZSCAN12O43309 604 aa15.06■□□□□ 0
LIG1-205ENST00000593425 LRATO95237 230 aa15.06■□□□□ 0
LIG1-205ENST00000593425 COX7A2P14406 83 aa15.06■□□□□ 0
LIG1-205ENST00000593425 STMN1P16949 149 aa15.06■□□□□ 0
LIG1-205ENST00000593425 CASP2P42575 452 aa15.06■□□□□ 0
LIG1-205ENST00000593425 ZKSCAN8Q15776 578 aaPredicted RBP15.06■□□□□ 0
LIG1-205ENST00000593425 TMEM35AQ53FP2 167 aa15.06■□□□□ 0
LIG1-205ENST00000593425 RIPPLY2Q5TAB7 128 aa15.06■□□□□ 0
LIG1-205ENST00000593425 KHDRBS2Q5VWX1 349 aaKnown RBP15.06■□□□□ 0
LIG1-205ENST00000593425 SLC22A10Q63ZE4 541 aa15.06■□□□□ 0
LIG1-205ENST00000593425 MED27Q6P2C8 311 aa15.06■□□□□ 0
LIG1-205ENST00000593425 SEM1Q6ZVN7 128 aa15.06■□□□□ 0
LIG1-205ENST00000593425 FBXW8Q8N3Y1 598 aa15.06■□□□□ 0
LIG1-205ENST00000593425 RELL2Q8NC24 303 aaPredicted RBP15.06■□□□□ 0
LIG1-205ENST00000593425 MYRIPQ8NFW9 859 aa15.06■□□□□ 0
LIG1-205ENST00000593425 UBXN10Q96LJ8 280 aa15.06■□□□□ 0
LIG1-205ENST00000593425 KRT12Q99456 494 aa15.06■□□□□ 0
LIG1-205ENST00000593425 FOXC2Q99958 501 aa15.06■□□□□ 0
LIG1-205ENST00000593425 GPATCH1Q9BRR8 931 aaKnown RBP15.06■□□□□ 0
LIG1-205ENST00000593425 OR51B5Q9H339 312 aa15.06■□□□□ 0
LIG1-205ENST00000593425 PRM3Q9NNZ6 103 aa15.06■□□□□ 0
LIG1-205ENST00000593425 RNF112Q9ULX5 631 aa15.06■□□□□ 0
LIG1-205ENST00000593425 KDM4EB2RXH2 506 aaPredicted RBP15.05■□□□□ -0
LIG1-205ENST00000593425 C1QAP02745 245 aa15.05■□□□□ -0
LIG1-205ENST00000593425 S100BP04271 92 aaPredicted RBP15.05■□□□□ -0
LIG1-205ENST00000593425 CD99P14209 185 aa15.05■□□□□ -0
LIG1-205ENST00000593425 GABRA1P14867 456 aa15.05■□□□□ -0
LIG1-205ENST00000593425 HNRNPH2P55795 449 aaKnown RBP15.05■□□□□ -0
LIG1-205ENST00000593425 RAB10P61026 200 aa15.05■□□□□ -0
LIG1-205ENST00000593425 HERVK_113P63132 956 aa15.05■□□□□ -0
LIG1-205ENST00000593425 ERVK-8P63133 956 aa15.05■□□□□ -0
LIG1-205ENST00000593425 KCNJ2P63252 427 aa15.05■□□□□ -0
LIG1-205ENST00000593425 MRPS25P82663 173 aaKnown RBP15.05■□□□□ -0
LIG1-205ENST00000593425 PLIN5Q00G26 463 aa15.05■□□□□ -0
LIG1-205ENST00000593425 TNFRSF17Q02223 184 aa15.05■□□□□ -0
LIG1-205ENST00000593425 FOLH1Q04609 750 aa15.05■□□□□ -0
LIG1-205ENST00000593425 DLG1Q12959 904 aa15.05■□□□□ -0
LIG1-205ENST00000593425 CBLBQ13191 982 aa15.05■□□□□ -0
LIG1-205ENST00000593425 SLAMF1Q13291 335 aa15.05■□□□□ -0
LIG1-205ENST00000593425 C18orf63Q68DL7 685 aa15.05■□□□□ -0
LIG1-205ENST00000593425 OR4C11Q6IEV9 310 aa15.05■□□□□ -0
LIG1-205ENST00000593425 LRRC25Q8N386 305 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms