RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 HSDL2Q6YN16 418 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 CHSY3Q70JA7 882 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 CCDC91Q7Z6B0 441 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 GPR180Q86V85 440 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 TICAM1Q8IUC6 712 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 C9orf40Q8IXQ3 194 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 ZCCHC7Q8N3Z6 543 aaKnown RBP13.63□□□□□ -0.23
USB1-210ENST00000565151 MARVELD2Q8N4S9 558 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 TMEM156Q8N614 296 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 PTGR2Q8N8N7 351 aaPredicted RBP13.63□□□□□ -0.23
USB1-210ENST00000565151 SRFBP1Q8NEF9 429 aaKnown RBP13.63□□□□□ -0.23
USB1-210ENST00000565151 OR14A16Q8NHC5 309 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 RGMAQ96B86 450 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 PHF21BQ96EK2 531 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 DMRTA2Q96SC8 542 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 PAFAH2Q99487 392 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 NOL11Q9H8H0 719 aaKnown RBP13.63□□□□□ -0.23
USB1-210ENST00000565151 ACTR8Q9H981 624 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 PLSCR2Q9NRY7 297 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 XPR1Q9UBH6 696 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 PCTPQ9UKL6 214 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 ENTPD4Q9Y227 616 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 KLF13Q9Y2Y9 288 aaPredicted RBP13.63□□□□□ -0.23
USB1-210ENST00000565151 MEMO1Q9Y316 297 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 KIAA1549Q9HCM3 1950 aa13.63□□□□□ -0.23
USB1-210ENST00000565151 CREBBPQ92793 2442 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 GLOD5A6NK44 160 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 PGRMC2O15173 223 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 SERPINB1P30740 379 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 HPDP32754 393 aaPredicted RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 STT3AP46977 705 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 RBPJQ06330 500 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 TRAF3Q13114 568 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 SERTAD2Q14140 314 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.62□□□□□ -0.23
USB1-210ENST00000565151 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 MYLK4Q86YV6 388 aaPredicted RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 RPRMLQ8N4K4 120 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 ZNF808Q8N4W9 903 aaPredicted RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 LRRN4CLQ8ND94 238 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 PSD4Q8NDX1 1056 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 AGAP11Q8TF27 550 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 DAZLQ92904 295 aaKnown RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 MARVELD3Q96A59 401 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 TMEM125Q96AQ2 219 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 MTFMTQ96DP5 389 aaKnown RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 SENP5Q96HI0 755 aaPredicted RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 FMO2Q99518 471 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 ROGDIQ9GZN7 287 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 RPF2Q9H7B2 306 aaKnown RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 DDX31Q9H8H2 851 aaKnown RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 SH2D2AQ9NP31 389 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 SEMA4BQ9NPR2 832 aaPredicted RBP13.62□□□□□ -0.23
USB1-210ENST00000565151 ZNF225Q9UK10 706 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 PCDHGA11Q9Y5H2 935 aa13.62□□□□□ -0.23
USB1-210ENST00000565151 INTS1Q8N201 2190 aaKnown RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 CCDC189A1A4V9 331 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 TRIM49D1C9J1S8 452 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 UGDHO60701 494 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 PDE9AO76083 593 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 GLSO94925 669 aaPredicted RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 CCL3P10147 92 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 TSPAN8P19075 237 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 TNNI3P19429 210 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 PTX3P26022 381 aaPredicted RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 PHBP35232 272 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 FOXO1Q12778 655 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 CUL3Q13618 768 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 BNC2Q6ZN30 1099 aaPredicted RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 GHDCQ8N2G8 530 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 FAM98AQ8NCA5 519 aaKnown RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 OR2M7Q8NG81 312 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 OR8K3Q8NH51 312 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 MAGED4Q96JG8 741 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 CCDC77Q9BR77 488 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 EPB41L4BQ9H329 900 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 PROK2Q9HC23 129 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 FARSBQ9NSD9 589 aaKnown RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 TEX10Q9NXF1 929 aaPredicted RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 MTRF1LQ9UGC7 380 aaKnown RBP13.61□□□□□ -0.23
USB1-210ENST00000565151 ADGRE2Q9UHX3 823 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 ANGPTL3Q9Y5C1 460 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 LIPGQ9Y5X9 500 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 MED12Q93074 2177 aa13.61□□□□□ -0.23
USB1-210ENST00000565151 A8MVJ9 347 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 KLRC4-KLRK1H3BQV0 150 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
USB1-210ENST00000565151 AIFM1O95831 613 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 INHBAP08476 426 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 RPS17P08708 135 aaKnown RBP13.6□□□□□ -0.23
USB1-210ENST00000565151 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 FAM58BPP0C7Q3 252 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 HTR1EP28566 365 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 SOX18P35713 384 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 KIR3DL1P43629 444 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 RAP1GDS1P52306 607 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 CDH13P55290 713 aa13.6□□□□□ -0.23
USB1-210ENST00000565151 RCN2Q14257 317 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms