RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MBNL1Q9NR56 388 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 GPATCH2Q9NW75 528 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 NKIRAS2Q9NYR9 191 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 AHSPQ9NZD4 102 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 GALPQ9UBC7 116 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SERGEFQ9UGK8 458 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PCDHGB4Q9UN71 923 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PLCL2Q9UPR0 1127 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 COPG1Q9Y678 874 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 A3GALT2U3KPV4 340 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TBC1D3KA0A087X1G2 549 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 FAM170AA1A519 330 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TBC1D3BA6NDS4 549 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TBC1D3FA6NER0 549 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TNFRSF10AO00220 468 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SLC30A4O14863 429 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 AXIN1O15169 862 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 FRS3O43559 492 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 GJA1P17302 382 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 GABRB1P18505 474 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 VIPR2P41587 438 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 MTNR1BP49286 362 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 STK19P49842 368 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 NR1H2P55055 460 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PPP2CBP62714 309 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PPP2CAP67775 309 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TNP2Q05952 138 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 IL10RAQ13651 578 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TBC1D3GQ6DHY5 549 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 OR52E8Q6IFG1 317 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 FBXO42Q6P3S6 717 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CCDC103Q8IW40 242 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 GLB1L2Q8IW92 636 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 FBXW8Q8N3Y1 598 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TBC1D19Q8N5T2 526 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 FITM2Q8N6M3 262 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 OR56A1Q8NGH5 318 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SLC2A12Q8TD20 617 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ATP6V1E2Q96A05 226 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SLC41A3Q96GZ6 507 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF668Q96K58 619 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 NR1H4Q96RI1 486 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ELF4Q99607 663 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ADAM19Q9H013 955 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ZCCHC4Q9H5U6 513 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 KLQ9UEF7 1012 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 RAB26Q9ULW5 256 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 RNF112Q9ULX5 631 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SNX5Q9Y5X3 404 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CHD9Q3L8U1 2897 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 IGHV1OR21-1A0A087WYE8 117 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 A0A0G2JPF8 293 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 HNRNPCL2B2RXH8 293 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 HNRNPCL3B7ZW38 293 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 NVLO15381 856 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ZBTB14O43829 449 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PMPCBO75439 489 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 HNRNPCL4P0DMR1 293 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ACADSP16219 412 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 MAOBP27338 520 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CMPK1P30085 196 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 AGTR2P50052 363 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 KCNK10P57789 538 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 STXBP1P61764 594 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TUBA4AP68366 448 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 IRF9Q00978 393 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PAX5Q02548 391 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TGM3Q08188 693 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 IRF3Q14653 427 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 HSP90B2PQ58FF3 399 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TOR2AQ5JU69 321 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PGBD2Q6P3X8 592 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 WDR88Q6ZMY6 472 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CDH26Q8IXH8 852 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 MRPL41Q8IXM3 137 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CA13Q8N1Q1 262 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 RNF148Q8N7C7 305 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM105Q8N8V8 129 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TTC9Q92623 222 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ADIPOR1Q96A54 375 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ANKRD9Q96BM1 317 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CCDC140Q96MF4 163 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CMTM3Q96MX0 182 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TSNARE1Q96NA8 513 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 MNTQ99583 582 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 EFHD1Q9BUP0 239 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CIPCQ9C0C6 399 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 DCAF13Q9NV06 445 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 RABL2AQ9UBK7 228 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SUFUQ9UMX1 484 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 RABL2BQ9UNT1 228 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 PCYT1BQ9Y5K3 369 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SOCS6O14544 535 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 GSC2O15499 205 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 NPIPB7O75200 414 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 SLC25A14O95258 325 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 SLC16A8O95907 504 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 WNT2P09544 360 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CDH1P12830 882 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CD33P20138 364 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms