RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 WDR92Q96MX6 357 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 MYADMQ96S97 322 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 FAM83CQ9BQN1 747 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 HDAC8Q9BY41 377 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 UCK2Q9BZX2 261 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 MVB12BQ9H7P6 319 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CXorf36Q9H7Y0 433 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SERGEFQ9UGK8 458 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 ENPP4Q9Y6X5 453 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 THSD7BQ9C0I4 1608 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 BTN3A3O00478 584 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PCDH17O14917 1159 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CH25HO95992 272 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 ALPPP05187 535 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 NDUFS1P28331 727 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PSMD7P51665 324 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 ITGA1P56199 1179 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SIM1P81133 766 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 PPP2R2BQ00005 443 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TUBA3CQ13748 450 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 ARHGAP19Q14CB8 494 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 COLEC12Q5KU26 742 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SPANXN2Q5MJ10 180 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 IRAK1BP1Q5VVH5 260 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 METRNLQ641Q3 311 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 BORAQ6PGQ7 559 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 NLGN4XQ8N0W4 816 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TCEANCQ8N8B7 351 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 GPR151Q8TDV0 419 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 EZH1Q92800 747 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 FGF14Q92915 247 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SLC38A2Q96QD8 506 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 MKRN2Q9H000 416 aaKnown RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 PELI2Q9HAT8 420 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 VNN3Q9NY84 501 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 GPR83Q9NYM4 423 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PRAMEF33A0A0G2JMD5 474 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CPSF4LA6NMK7 179 aaKnown RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 WASHC1A8K0Z3 465 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 B4DGG1 531 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CLDN25C9JDP6 229 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 M0R3H8 397 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TLR4O00206 839 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PPM1DO15297 605 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TLX2O43763 284 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 APOL3O95236 402 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 MED26O95402 600 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CDK4P11802 303 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PAICSP22234 425 aaKnown RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 OPRD1P41143 372 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SEPHS1P49903 392 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TMBIM6P55061 237 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 RPS3AP61247 264 aaKnown RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 DPTQ07507 201 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 INAQ16352 499 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TIMM50Q3ZCQ8 353 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SNAP47Q5SQN1 464 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 ZNF691Q5VV52 312 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 ADAMTSL4Q6UY14 1074 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 WASH2PQ6VEQ5 465 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 IKBIPQ70UQ0 350 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PIWIL3Q7Z3Z3 882 aaKnown RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 MEX3DQ86XN8 651 aaKnown RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 PTOV1Q86YD1 416 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SLC30A8Q8IWU4 369 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 SGPP1Q9BX95 441 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PREBQ9HCU5 417 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 HRASLS2Q9NWW9 162 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 OR10H1Q9Y4A9 318 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 KPNA4O00629 521 aaPredicted RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 NR2F6P10588 404 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 LAMP2P13473 410 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 EPHA2P29317 976 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 MRPL19P49406 292 aaKnown RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 CSNK2BP67870 215 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 ZNF846Q147U1 533 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 SYPL1Q16563 259 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 ZC3H12BQ5HYM0 836 aaKnown RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 ACOT4Q8N9L9 421 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 KBTBD8Q8NFY9 601 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 TAMM41Q96BW9 452 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 TUBA1CQ9BQE3 449 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 RBCK1Q9BYM8 510 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 KRCC1Q9NPI7 259 aaPredicted RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 RPS6KB2Q9UBS0 482 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 FRS3O43559 492 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 CLPXO76031 633 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 RHCEP18577 417 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 EMX1Q04741 257 aaPredicted RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 MXD1Q05195 221 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 STX4Q12846 297 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 MTAPQ13126 283 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 CAMK1Q14012 370 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 CLCA4Q14CN2 919 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 SUZ12Q15022 739 aaKnown RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 LARS2Q15031 903 aaKnown RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 KLHL12Q53G59 568 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 ARMCX4Q5H9R4 360 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms