RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 BTKQ06187 659 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 TUBA3CQ13748 450 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 ABHD17BQ5VST6 288 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 SPINK14Q6IE38 97 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 TUBA3EQ6PEY2 450 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 CYP20A1Q6UW02 462 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 EXOC3L1Q86VI1 746 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 RIBC1Q8N443 379 aaPredicted RBP12.64□□□□□ -0.39
SNF8-206ENST00000509989 B3GNT7Q8NFL0 401 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 HAS2Q92819 552 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 TM4SF18Q96CE8 201 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 ZNF395Q9H8N7 513 aaPredicted RBP12.64□□□□□ -0.39
SNF8-206ENST00000509989 ADAP2Q9NPF8 381 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
SNF8-206ENST00000509989 MKS1Q9NXB0 559 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 HEY2Q9UBP5 337 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 VTI1BQ9UEU0 232 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 GABRR3A8MPY1 467 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 CLPSP04118 112 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 CT62P0C5K7 136 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 HMOX2P30519 316 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 HPDP32754 393 aaPredicted RBP12.63□□□□□ -0.39
SNF8-206ENST00000509989 SOX18P35713 384 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 PKNOX1P55347 436 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 MLF1P58340 268 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 STX4Q12846 297 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 ELAVL1Q15717 326 aaKnown RBP12.63□□□□□ -0.39
SNF8-206ENST00000509989 CEP85LQ5SZL2 805 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 CCNYL2Q5T2Q4 361 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 RPS19BP1Q86WX3 136 aaKnown RBP12.63□□□□□ -0.39
SNF8-206ENST00000509989 HPS6Q86YV9 775 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 MDS2Q8NDY4 140 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 SIMC1Q8NDZ2 872 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 RDH11Q8TC12 318 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 SLC2A12Q8TD20 617 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 ADAMTS18Q8TE60 1221 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 CHTF18Q8WVB6 975 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 PKNOX2Q96KN3 472 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 EBPLQ9BY08 206 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 SLC29A3Q9BZD2 475 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 OR8D2Q9GZM6 311 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 TUBB1Q9H4B7 451 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 SNX6Q9UNH7 406 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 PPIEQ9UNP9 301 aaKnown RBP12.63□□□□□ -0.39
SNF8-206ENST00000509989 MRPS33Q9Y291 106 aaKnown RBP12.63□□□□□ -0.39
SNF8-206ENST00000509989 FIS1Q9Y3D6 152 aa12.63□□□□□ -0.39
SNF8-206ENST00000509989 USP9XQ93008 2570 aaPredicted RBP12.62□□□□□ -0.39
SNF8-206ENST00000509989 DOPEY2Q9Y3R5 2298 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 OR5H15A6NDH6 313 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 NEURL1O76050 574 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 MLYCDO95822 493 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 NR2F6P10588 404 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 TNNI3P19429 210 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 ETV4P43268 484 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 TSFMP43897 325 aaKnown RBP12.62□□□□□ -0.39
SNF8-206ENST00000509989 ARFIP1P53367 373 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 TLR1Q15399 786 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 TNFAIP8L3Q5GJ75 292 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 NDUFAF5Q5TEU4 345 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 LIPMQ5VYY2 423 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 OR2T11Q8NH01 316 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 GRHL3Q8TE85 626 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 TM9SF4Q92544 642 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 ZNF354BQ96LW1 612 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 BARD1Q99728 777 aaKnown RBP12.62□□□□□ -0.39
SNF8-206ENST00000509989 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNF8-206ENST00000509989 BRF2Q9HAW0 419 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 KLHL1Q9NR64 748 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 LYARQ9NX58 379 aaKnown RBP12.62□□□□□ -0.39
SNF8-206ENST00000509989 VPS29Q9UBQ0 182 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 GIMAP2Q9UG22 337 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 PHF11Q9UIL8 331 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 CES1P1Q9UKY3 287 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 CCL27Q9Y4X3 112 aa12.62□□□□□ -0.39
SNF8-206ENST00000509989 COPG1Q9Y678 874 aaKnown RBP12.62□□□□□ -0.39
SNF8-206ENST00000509989 NINQ8N4C6 2090 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 FREM3P0C091 2139 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 DYTNA2CJ06 578 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 WDR91A4D1P6 747 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 WWP2O00308 870 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 ZNHIT1O43257 154 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 TRIM13O60858 407 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 ULK1O75385 1050 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 NME6O75414 186 aaPredicted RBP12.61□□□□□ -0.39
SNF8-206ENST00000509989 GPR75O95800 540 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 KRT6AP02538 564 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 KRT6BP04259 564 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 ENO1P06733 434 aaKnown RBP12.61□□□□□ -0.39
SNF8-206ENST00000509989 RNF224P0DH78 156 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 ALOX15P16050 662 aaPredicted RBP12.61□□□□□ -0.39
SNF8-206ENST00000509989 MST1P26927 711 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 STT3AP46977 705 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 KRT6CP48668 564 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 CLCN2P51788 898 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 NR0B1P51843 470 aaKnown RBP12.61□□□□□ -0.39
SNF8-206ENST00000509989 NR6A1Q15406 480 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 OR1C1Q15619 314 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms