RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 PRAMEF4O60810 478 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ERLIN1O75477 346 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 SEMA3DO95025 777 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 SHBGP04278 402 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 SERPINA7P05543 415 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PCNAP12004 261 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 HSD3B1P14060 373 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CD22P20273 847 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 IMPDH1P20839 514 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 HSD3B2P26439 372 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CRHR1P34998 444 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 GMPRP36959 345 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ARL1P40616 181 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 RAP1GDS1P52306 607 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PRKAA2P54646 552 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 HSD17B7P56937 341 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 RAB8AP61006 207 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 EEF1A2Q05639 463 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 SLC18A2Q05940 514 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 IFT88Q13099 833 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CUL3Q13618 768 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PCOLCEQ15113 449 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 TERF2Q15554 542 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 EXT1Q16394 746 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ERCC6LQ2NKX8 1250 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 AP5B1Q2VPB7 878 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 RNFT1Q5M7Z0 435 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 DEPDC1Q5TB30 811 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 MFSD4BQ5TF39 518 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PRAMEF9Q5VWM5 478 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 KHDRBS2Q5VWX1 349 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 TMEM198Q66K66 360 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CXXC5Q7LFL8 322 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PRSS41Q7RTY9 318 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CPEB2Q7Z5Q1 589 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 TMEM200AQ86VY9 491 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 MYLK4Q86YV6 388 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ZNF595Q8IYB9 648 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PRSS58Q8IYP2 241 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CA13Q8N1Q1 262 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ZCCHC7Q8N3Z6 543 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 TMEM151AQ8N4L1 468 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CHDHQ8NE62 594 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 HUS1BQ8NHY5 278 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ZNF483Q8TF39 744 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 RGMAQ96B86 450 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 L3HYPDHQ96EM0 354 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PEX11GQ96HA9 241 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PKNOX2Q96KN3 472 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 SIGLEC12Q96PQ1 595 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 SERPINI1Q99574 410 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 LPAR4Q99677 370 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 MACROD1Q9BQ69 325 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 VKORC1Q9BQB6 163 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 PARD6BQ9BYG5 372 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.6□□□□□ -1.032e-8■■□□□ 14.3
UBE2D3-223ENST00000508249 NOL11Q9H8H0 719 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 DMRT3Q9NQL9 472 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 NMRK1Q9NWW6 199 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 AHSPQ9NZD4 102 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 TMEM216Q9P0N5 145 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 TRPS1Q9UHF7 1281 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ST6GALNAC2Q9UJ37 374 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 SNX6Q9UNH7 406 aa8.6□□□□□ -1.03
UBE2D3-223ENST00000508249 ZNF860A6NHJ4 632 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 PRMT3O60678 531 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 SUPT7LO94864 414 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 SIX3O95343 332 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 STATHP02808 62 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 ENO1P06733 434 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 SBK3P0C264 359 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 MYL2P10916 166 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 KRT4P19013 534 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 HIST1H1TP22492 207 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 PPP2R1BP30154 601 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 HNRNPH1P31943 449 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 SSR2P43308 183 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 SLCO1A2P46721 670 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 ST13P50502 369 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 CASP6P55212 293 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 PKNOX1P55347 436 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 DNAJB13P59910 316 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 PPP2R2AP63151 447 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 BTN3A2P78410 334 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 RHAGQ02094 409 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 FOLH1Q04609 750 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 CLCQ05315 142 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 TRAF3Q13114 568 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 NSDHLQ15738 373 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 CPSF6Q16630 551 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 SYT16Q17RD7 645 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 ZNF678Q5SXM1 525 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 FRG2Q64ET8 278 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 PLAG1Q6DJT9 500 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 TTC19Q6DKK2 380 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 ZYG11AQ6WRX3 759 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 SH2D5Q6ZV89 423 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 PAGE2Q7Z2X7 111 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
UBE2D3-223ENST00000508249 MILR1Q7Z6M3 343 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms