RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PPP6CO00743 305 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 HCN1O60741 890 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OR4F21O95013 312 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 WDPCPO95876 746 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IGHV2-5P01817 119 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IGHA2P01877 340 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 C9P02748 559 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ATP5A1P25705 553 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IVDP26440 423 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CCND3P30281 292 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RPL4P36578 427 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RPS9P46781 194 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IDH3AP50213 366 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PER3P56645 1201 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CDC42P60953 191 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PIGFQ07326 219 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC32Q14392 662 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NDUFAF6Q330K2 333 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 COLEC12Q5KU26 742 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CDC73Q6P1J9 531 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NOXA1Q86UR1 476 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 COMTD1Q86VU5 262 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OOSP2Q86WS3 158 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM217AQ8IXS0 508 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RNF113BQ8IZP6 322 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PRSS35Q8N3Z0 413 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC17Q8N6Y2 441 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM181AQ8N9Y4 354 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 DYNC2LI1Q8TCX1 351 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PIH1D2Q8WWB5 315 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC13A3Q8WWT9 602 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 MYLPFQ96A32 169 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 EXOSC8Q96B26 276 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PYCR2Q96C36 320 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SMARCD1Q96GM5 515 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM210BQ96KR6 192 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 C12orf42Q96LP6 360 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TRNT1Q96Q11 434 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 VAT1Q99536 393 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GPR21Q99679 349 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ADI1Q9BV57 179 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 COLEC11Q9BWP8 271 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PPP1R3EQ9H7J1 279 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 KAT8Q9H7Z6 458 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RANGRFQ9HD47 186 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NANSQ9NR45 359 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SNTG1Q9NSN8 517 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TDP1Q9NUW8 608 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 COMMD3Q9UBI1 195 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CD300AQ9UGN4 299 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 KCNE2Q9Y6J6 123 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LTBP2Q14767 1821 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 H0YIV9 168 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 I6L893 689 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SIGLEC5O15389 551 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LDB2O43679 373 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SIGLEC6O43699 453 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 AKAP8O43823 692 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GPR37L1O60883 481 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 UPK1BO75841 260 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OR6A2O95222 327 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CSF2P04141 144 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IFNA16P05015 189 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LGALS2P05162 132 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 HOXB2P14652 356 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 KCNA5P22460 613 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 MC4RP32245 332 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TGFBR1P36897 503 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GUCA1AP43080 201 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC18A1P54219 525 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OAZ1P54368 228 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CDC42EP1Q00587 391 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 HMGCS1Q01581 520 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SIGLEC14Q08ET2 396 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ECH1Q13011 328 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 BIKQ13323 160 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ADAM15Q13444 863 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IL18Q14116 193 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF846Q147U1 533 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SOWAHAQ2M3V2 549 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TIMM50Q3ZCQ8 353 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PKDCCQ504Y2 493 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TAPT1Q6NXT6 567 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ADGRD1Q6QNK2 874 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SHISA2Q6UWI4 295 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FRMD7Q6ZUT3 714 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PHF13Q86YI8 300 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TGIF2LXQ8IUE1 241 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM126BQ8IUX1 230 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CCDC185Q8N715 623 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OR6Q1Q8NGQ2 317 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GRPEL2Q8TAA5 225 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC20Q8TCA0 184 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SOCS4Q8WXH5 440 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TFAP2CQ92754 450 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FBXO17Q96EF6 278 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IL4I1Q96RQ9 567 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NODALQ96S42 347 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ACO2Q99798 780 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FTHL17Q9BXU8 183 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms