RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ITGA3P26006 1051 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 GSTM5P46439 218 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 RPL14P50914 215 aaKnown RBP23.5■■□□□ 1.35
LSM6-202ENST00000502781 SLC26A5P58743 744 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 PPP2R2AP63151 447 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 FOLH1Q04609 750 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 STX4Q12846 297 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 BIKQ13323 160 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 EXT1Q16394 746 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 ATG16L1Q676U5 607 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 DDIASQ8IXT1 998 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.5■■□□□ 1.35
LSM6-202ENST00000502781 M1APQ8TC57 530 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 PSMF1Q92530 271 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 SMAD5Q99717 465 aaKnown RBP23.5■■□□□ 1.35
LSM6-202ENST00000502781 LRTM1Q9HBL6 345 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 ADAP2Q9NPF8 381 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 GPR83Q9NYM4 423 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 SPTA1P02549 2419 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 C1orf226A1L170 272 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 GLOD5A6NK44 160 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 CELA2AP08217 269 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 ANXA4P09525 319 aaPredicted RBP23.49■■□□□ 1.35
LSM6-202ENST00000502781 OCRLQ01968 901 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 ID2Q02363 134 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 ELAVL1Q15717 326 aaKnown RBP23.49■■□□□ 1.35
LSM6-202ENST00000502781 OR4N5Q8IXE1 308 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 C9orf43Q8TAL5 461 aaPredicted RBP23.49■■□□□ 1.35
LSM6-202ENST00000502781 DOCK10Q96BY6 2186 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 THOC3Q96J01 351 aaKnown RBP23.49■■□□□ 1.35
LSM6-202ENST00000502781 C3orf30Q96M34 536 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 SEMA4CQ9C0C4 833 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 MMP25Q9NPA2 562 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 PCDHGB7Q9Y5F8 929 aa23.49■■□□□ 1.35
LSM6-202ENST00000502781 GNG14A0A1W2PPG7 69 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 K7EM74 188 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 ATP8B1O43520 1251 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 KLHL41O60662 606 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 SEC22BO75396 215 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 SKAP2O75563 359 aaPredicted RBP23.48■■□□□ 1.35
LSM6-202ENST00000502781 TAS2R50P59544 299 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 AP2B1P63010 937 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 NR6A1Q15406 480 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 BTBD16Q32M84 506 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 SOWAHCQ53LP3 525 aaPredicted RBP23.48■■□□□ 1.35
LSM6-202ENST00000502781 NOXRED1Q6NXP6 359 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 JMJD6Q6NYC1 403 aaPredicted RBP23.48■■□□□ 1.35
LSM6-202ENST00000502781 SLC48A1Q6P1K1 146 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 MMP21Q8N119 569 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 C16orf78Q8WTQ4 265 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 PTPMT1Q8WUK0 201 aaPredicted RBP23.48■■□□□ 1.35
LSM6-202ENST00000502781 ZNF75CPQ92670 426 aaPredicted RBP23.48■■□□□ 1.35
LSM6-202ENST00000502781 EBPLQ9BY08 206 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 PNO1Q9NRX1 252 aaKnown RBP23.48■■□□□ 1.35
LSM6-202ENST00000502781 DLGAP4Q9Y2H0 992 aa23.48■■□□□ 1.35
LSM6-202ENST00000502781 POLR3HQ9Y535 204 aaPredicted RBP23.48■■□□□ 1.35
LSM6-202ENST00000502781 PDGFAP04085 211 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 JUNP05412 331 aaKnown RBP23.47■■□□□ 1.35
LSM6-202ENST00000502781 IL3P08700 152 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 ITGAMP11215 1152 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 DRD2P14416 443 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 STT3AP46977 705 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 GPR143P51810 404 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 ZNF763Q0D2J5 394 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 RFTN2Q52LD8 501 aaPredicted RBP23.47■■□□□ 1.35
LSM6-202ENST00000502781 ELP5Q8TE02 316 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 C19orf60Q96EN9 201 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 FAIM2Q9BWQ8 316 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 SLC25A18Q9H1K4 315 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 HEY2Q9UBP5 337 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 G3BP2Q9UN86 482 aaKnown RBP23.47■■□□□ 1.35
LSM6-202ENST00000502781 TP53TG5Q9Y2B4 290 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 WBP11Q9Y2W2 641 aaKnown RBP23.47■■□□□ 1.35
LSM6-202ENST00000502781 TMED5Q9Y3A6 229 aa23.47■■□□□ 1.35
LSM6-202ENST00000502781 MYOCOSA0A1B0GUC4 107 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 A8MUA0 341 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 MYO1DO94832 1006 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 SOX11P35716 441 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 RAPSNQ13702 412 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 VWA5B1Q5TIE3 1220 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 H3F3CQ6NXT2 135 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 ST13P4Q8IZP2 240 aaPredicted RBP23.46■■□□□ 1.35
LSM6-202ENST00000502781 TMEM132CQ8N3T6 1108 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 APCDD1LQ8NCL9 501 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 B3GNT7Q8NFL0 401 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 SLC39A7Q92504 469 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 PPP3R2Q96LZ3 170 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 MYNNQ9NPC7 610 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 PFDN4Q9NQP4 134 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 PNPOQ9NVS9 261 aa23.46■■□□□ 1.35
LSM6-202ENST00000502781 IFNA16P05015 189 aa23.45■■□□□ 1.34
LSM6-202ENST00000502781 ALOX15P16050 662 aaPredicted RBP23.45■■□□□ 1.34
LSM6-202ENST00000502781 PGDP52209 483 aa23.45■■□□□ 1.34
LSM6-202ENST00000502781 IRAK1BP1Q5VVH5 260 aa23.45■■□□□ 1.34
LSM6-202ENST00000502781 FAM71E1Q6IPT2 247 aa23.45■■□□□ 1.34
LSM6-202ENST00000502781 OR14A16Q8NHC5 309 aa23.45■■□□□ 1.34
LSM6-202ENST00000502781 DAZLQ92904 295 aaKnown RBP23.45■■□□□ 1.34
LSM6-202ENST00000502781 C5AR2Q9P296 337 aa23.45■■□□□ 1.34
LSM6-202ENST00000502781 RALYQ9UKM9 306 aaKnown RBP23.45■■□□□ 1.34
LSM6-202ENST00000502781 ATP6AP2A0A1C7CYW4 349 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms