RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 TWISTNBQ3B726 338 aaPredicted RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 LBHQ53QV2 105 aaPredicted RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 FAM133BQ5BKY9 247 aaKnown RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 SPECC1Q5M775 1068 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 CES4AQ5XG92 561 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 TTC27Q6P3X3 843 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 DOK6Q6PKX4 331 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 PRSS55Q6UWB4 352 aaPredicted RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 ANKRD33Q7Z3H0 272 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 ZER1Q7Z7L7 766 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 VSIG1Q86XK7 387 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 CATSPERDQ86XM0 798 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 DZIP1Q86YF9 867 aaKnown RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 NUP37Q8NFH4 326 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 C2orf48Q96LS8 159 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 EGLN3Q9H6Z9 239 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 MTHFD2LQ9H903 347 aaPredicted RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.07□□□□□ -1.92
COPA-204ENST00000481522 ZNF469Q96JG9 3925 aaPredicted RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 FRMPD4Q14CM0 1322 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 USP42Q9H9J4 1324 aaKnown RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 COL11A1P12107 1806 aaPredicted RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 CACNA1FO60840 1977 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 MYO10Q9HD67 2058 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 TRAV34A0A0B4J273 112 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 YDJCA8MPS7 323 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 TMEM150CB9EJG8 249 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 FAM86B1E9PN63 330 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 E9PQ18 207 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 FLRT2O43155 660 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CYTIPO60759 359 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 FCGR3BO75015 233 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CEACAM4O75871 244 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 FAM86B2P0C5J1 330 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 FAM58BPP0C7Q3 252 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 SCG2P13521 617 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 IFNAR1P17181 557 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 AZU1P20160 251 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 HNF4AP41235 474 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 NOVP48745 357 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CLDN17P56750 224 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 IRX6P78412 446 aaPredicted RBP3.06□□□□□ -1.92
COPA-204ENST00000481522 IRX4P78413 519 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 SCN1BQ07699 218 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 MTF1Q14872 753 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 TAZQ16635 292 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CDO1Q16878 200 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 MOGAT2Q3SYC2 334 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 C2CD6Q53TS8 623 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 TXNRD3NBQ6F5E7 133 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 OR4C11Q6IEV9 310 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 FAM166AQ6J272 317 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CAVIN1Q6NZI2 390 aaKnown RBP3.06□□□□□ -1.92
COPA-204ENST00000481522 FRRS1Q6ZNA5 592 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 SPATA19Q7Z5L4 167 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CPEB2Q7Z5Q1 589 aaKnown RBP3.06□□□□□ -1.92
COPA-204ENST00000481522 PIGWQ7Z7B1 504 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CROCCP3Q8IVE0 287 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 PRSS35Q8N3Z0 413 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 TCEANCQ8N8B7 351 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 OR4D10Q8NGI6 311 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 NCOA7Q8NI08 942 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 OCC1Q8TAD7 63 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 FAM222BQ8WU58 562 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 CHURC1Q8WUH1 139 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 ARAP2Q8WZ64 1704 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 ST6GALNAC6Q969X2 333 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 SPATA17Q96L03 361 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 ZMAT2Q96NC0 199 aaKnown RBP3.06□□□□□ -1.92
COPA-204ENST00000481522 PI4K2AQ9BTU6 479 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 B3GAT2Q9NPZ5 323 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 PHPT1Q9NRX4 125 aaPredicted RBP3.06□□□□□ -1.92
COPA-204ENST00000481522 EXOC1Q9NV70 894 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 NDE1Q9NXR1 346 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 HACD3Q9P035 362 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 LNPEPQ9UIQ6 1025 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 KLK13Q9UKR3 277 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 RUVBL2Q9Y230 463 aaKnown RBP3.06□□□□□ -1.92
COPA-204ENST00000481522 MOB4Q9Y3A3 225 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 SMAD5-AS1Q9Y6J3 95 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 COLEC10Q9Y6Z7 277 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 TENM3Q9P273 2699 aa3.06□□□□□ -1.92
COPA-204ENST00000481522 TRAV18A0A075B6X5 111 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 MEX3AA1L020 520 aaKnown RBP3.05□□□□□ -1.92
COPA-204ENST00000481522 MTMR11A4FU01 709 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 MPTX1A8MV57 137 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 SURF4O15260 269 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 CD59P13987 128 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 HMGB2P26583 209 aaKnown RBP3.05□□□□□ -1.92
COPA-204ENST00000481522 RBMS1P29558 406 aaKnown RBP3.05□□□□□ -1.92
COPA-204ENST00000481522 TMEM50BP56557 158 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 SLC8A3P57103 927 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 LMO4P61968 165 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 TRA2AQ13595 282 aaKnown RBP eCLIP3.05□□□□□ -1.92
COPA-204ENST00000481522 TAF1BQ53T94 588 aaPredicted RBP3.05□□□□□ -1.92
COPA-204ENST00000481522 ATP1A1-AS1Q5TC04 95 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 TMEM182Q6ZP80 229 aaPredicted RBP3.05□□□□□ -1.92
COPA-204ENST00000481522 FAM47EQ6ZV65 393 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 GPR141Q7Z602 305 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms