RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NUFIP1Q9UHK0 495 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 SLCO3A1Q9UIG8 710 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 XRN1Q8IZH2 1706 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 AKAP12Q02952 1782 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 RFC2P35250 354 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 GPR4P46093 362 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 CRTC1Q6UUV9 634 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ZNF296Q8WUU4 475 aaPredicted RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 SMARCD2Q92925 531 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 C1orf74Q96LT6 269 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ZNF317Q96PQ6 595 aaPredicted RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 C16orf70Q9BSU1 422 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 PCDHGA6Q9Y5G7 932 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 CCRL2O00421 344 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 DNAJB13P59910 316 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 GAS6Q14393 721 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ERMP1Q7Z2K6 904 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 OR13C3Q8NGS6 347 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ZNF675Q8TD23 568 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 DPH2Q9BQC3 489 aaPredicted RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 DPH7Q9BTV6 452 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 FN3KQ9H479 309 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ST14Q9Y5Y6 855 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 LOXHD1Q8IVV2 1947 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 hCG_1807616A0A1W2PRN6 198 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 BHMG1C9JSJ3 638 aaPredicted RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 GTF2F2P13984 249 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 S1PR1P21453 382 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 F8A1P23610 371 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 GLP1RP43220 463 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ST3GAL4Q11206 333 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 SLC44A3Q8N4M1 653 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 KCNJ9Q92806 393 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 G6PC3Q9BUM1 346 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 RGPD5Q99666 1765 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 MYH14Q7Z406 1995 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 FARS2O95363 451 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 IFNA7P01567 189 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 CFL1P23528 166 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 OTX2P32243 289 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 SLC10A2Q12908 348 aaPredicted RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 RDH12Q96NR8 316 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 PCYT2Q99447 389 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 FAM83CQ9BQN1 747 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 PPP4R1LQ9P1A2 415 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 IL20RAQ9UHF4 553 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ACSL6Q9UKU0 697 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 ABCG2Q9UNQ0 655 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 MGAT4BQ9UQ53 548 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 A6NLC8 198 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 SNAP29O95721 258 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 RPA4Q13156 261 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 TIFABQ6ZNK6 161 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 TMEM234Q8WY98 164 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 DEFB126Q9BYW3 111 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 C1orf21Q9H246 121 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MOV10Q9HCE1 1003 aaKnown RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 PDE7BQ9NP56 450 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MRPL15Q9P015 296 aaKnown RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 WASF3Q9UPY6 502 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 PADI2Q9Y2J8 665 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 FLRT2O43155 660 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 GNAO1P09471 354 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 IQCF3P0C7M6 154 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 FGF3P11487 239 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 OR4D2P58180 307 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 EXOC3L2Q2M3D2 409 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 RNF111Q6ZNA4 994 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 THAP4Q8WY91 577 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 TPSD1Q9BZJ3 242 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 OR10A4Q9H209 315 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MYEF2Q9P2K5 600 aaKnown RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 DISC1C4P0D8 188 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 OR2B3O76000 313 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 NR2C1P13056 603 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 CD40LGP29965 261 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MAB21L1Q13394 359 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 PON2Q15165 354 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 LPAL2Q16609 132 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 RUNDC3AQ59EK9 446 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 OR10T2Q8NGX3 314 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 NEIL3Q8TAT5 605 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MUS81Q96NY9 551 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MAFKO60675 156 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 BCAS2O75934 225 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 PRKCAP17252 672 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 TUBG1P23258 451 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 HSD3B2P26439 372 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 C18orf21Q32NC0 220 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 TAS1R3Q7RTX0 852 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 IMP4Q96G21 291 aaKnown RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 ARHGAP39Q9C0H5 1083 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 TMEM168Q9H0V1 697 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 TUBA8Q9NY65 449 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 ZNF142P52746 1687 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 M0R129 80 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 SEC14L5O43304 696 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 YES1P07947 543 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 ZNF84P51523 738 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 CSNK1A1LQ8N752 337 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms