RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 SCARB1Q8WTV0 552 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 MOGAT1Q96PD6 335 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 CPEB1Q9BZB8 566 aaKnown RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 OR51J1Q9H342 316 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 DDX31Q9H8H2 851 aaKnown RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 EVA1AQ9H8M9 152 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 VAPAQ9P0L0 249 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 SAMD4AQ9UPU9 718 aaKnown RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 KMT2BQ9UMN6 2715 aaPredicted RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 ZDBF2Q9HCK1 2354 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 SMIM28A0A1B0GU29 152 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 G3V3Q6 166 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 GFRA2O00451 464 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 GPR182O15218 404 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 CCNDBP1O95273 360 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 GOT1P17174 413 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 MMP12P39900 470 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 NNMTP40261 264 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 ARFIP1P53367 373 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 CRYZQ08257 329 aaKnown RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 LCP2Q13094 533 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 EIF2S3LQ2VIR3 472 aaKnown RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 FRMPD2BQ6IN97 320 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 NAPEPLDQ6IQ20 393 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 FAM180BQ6P0A1 224 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 ANKRD33Q7Z3H0 272 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 DENND1CQ8IV53 801 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 RNF113BQ8IZP6 322 aaKnown RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 C7orf31Q8N865 590 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 TMEM163Q8TC26 289 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 OTULINQ96BN8 352 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 OTUB1Q96FW1 271 aaPredicted RBP10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 SFXN2Q96NB2 322 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 KCNA7Q96RP8 456 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 TCEAL7Q9BRU2 100 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 FN3KQ9H479 309 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 SLAMF7Q9NQ25 335 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 SSR3Q9UNL2 185 aa10.28□□□□□ -0.76
CHMP2B-203ENST00000471660 ISM1B1AKI9 464 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 GTPBP1O00178 669 aaKnown RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 GABRDO14764 452 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 VIPP01282 170 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 NFKB1P19838 968 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 CXCL3P19876 107 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 TSPAN7P41732 249 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 MRPS6P82932 125 aaKnown RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 RPL6Q02878 288 aaKnown RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 ZNF33AQ06730 810 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 HNRNPA0Q13151 305 aaKnown RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 DSG2Q14126 1118 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 LAPTM4AQ15012 233 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 PTPRRQ15256 657 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 SOWAHAQ2M3V2 549 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 UBXN11Q5T124 520 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 BCL2L15Q5TBC7 163 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 VASNQ6EMK4 673 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 ZNF549Q6P9A3 640 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 PGAP1Q75T13 922 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 KANSL1Q7Z3B3 1105 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 TRMT11Q7Z4G4 463 aaKnown RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 KDELC2Q7Z4H8 507 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 NAXDQ8IW45 347 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 B3GNT7Q8NFL0 401 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 OR2T11Q8NH01 316 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 NETO1Q8TDF5 533 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 GLYATL2Q8WU03 294 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 NTAN1Q96AB6 310 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 SCRN2Q96FV2 425 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 ZNF599Q96NL3 588 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 DUSP16Q9BY84 665 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 ANKRD19PQ9H560 264 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 SEBOXQ9HB31 216 aaPredicted RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 AMBNQ9NP70 447 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 ZNF275Q9NSD4 429 aaPredicted RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 ZNF226Q9NYT6 803 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 TBX21Q9UL17 535 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 CFAP20Q9Y6A4 193 aaKnown RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 DENND4AQ7Z401 1863 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 LOC390937A0A1W2PQ73 354 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 TCRBV16S1A1N1A0A5B0 115 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 GPR171O14626 319 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 SCAMP1O15126 338 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 PSMD3O43242 534 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 GRAP2O75791 330 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 CDRT1O95170 752 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 HAPLN1P10915 354 aaPredicted RBP10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 RHCEP18577 417 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 RAB3BP20337 219 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 LCN1P31025 176 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 GZMMP51124 257 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 RAG2P55895 527 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 ITGA1P56199 1179 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 GTF2H3Q13889 308 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 TRAM2Q15035 370 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 KIAA0040Q15053 153 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 CHRNA6Q15825 494 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 SPIN4Q56A73 249 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 AFTPHQ6ULP2 937 aa10.27□□□□□ -0.77
CHMP2B-203ENST00000471660 C16orf59Q7L2K0 433 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms